Variovorax sp. PMC12: C4F17_15555
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Entry
C4F17_15555 CDS
T05380
Symbol
pgaC
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine synthase
KO
K11936
poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
C4F17_15555 (pgaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vam01003
]
C4F17_15555 (pgaC)
Glycosyltransferases [BR:
vam01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C4F17_15555 (pgaC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Chitin_synth_2
Glyco_tranf_2_2
Glyco_tranf_2_4
DUF3772
Motif
Other DBs
NCBI-ProteinID:
AVQ82260
LinkDB
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Position
1:3338550..3339827
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AA seq
425 aa
AA seq
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MTTSHFLAQTLPSLLFGFVFYYPFFMAYVWMAGGLSHAWVFERKRDVDVNPLDLLPSRPL
VTVVVPCFNEAPHLREVIEQLMRTRYPNYEVIAVNDGSTDGTGELLDEMTKEYSRLRVIH
NASNQGKAVGLNTACQLARGEYILGIDGDALVDEDAIAWMLRPMLASERIGAVTGNPRIR
TRTTLLGRMQVGEFSSIIGLIKRSQQLVGTLFTVSGVIAMFRRRAVIDVGFWSPDVLTED
IDMSWKLQLGGWKLRFEPRALCWILMPETLRGLWKQRQRWAIGGIQTMLRNTTSILKPRN
WRMWLVYAEYMTSVVWAYAMAAVLVVSLARPFLPIESAWHSALLPHWQGTLLAMTCILQM
LLSLWIDRRYDRDLMRYFAGTIWYPIAFWTITMATTVIALPKALIRRRGKRAVWTSPDRG
VSDAP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagccacttccttgcgcagacgctgccgtcgctgctgttcggcttcgtcttc
tattacccgttcttcatggcctacgtgtggatggcgggcggcctctcgcatgcctgggtg
ttcgagcgcaagcgcgacgtcgatgtcaacccgctcgacctgctgccctcgcgcccgctg
gtgacggtggtggtgccctgcttcaacgaggcgccgcacctgcgcgaagtgatcgagcag
ctcatgcgcacacgctacccgaactacgaggtgatcgccgtgaacgacggcagcaccgac
ggcaccggcgagctgctcgacgagatgacgaaggaatacagccggcttcgcgtgatccac
aacgccagcaaccagggcaaggccgtagggctcaacaccgcctgccagctcgcgcgcggc
gaatacatcctgggcatcgacggcgacgcgctggtcgacgaggacgccatcgcctggatg
ctgcggcccatgctggcgtcggagcgcatcggcgccgtgacgggcaacccgcgcatccgc
acccgcaccacgctgctcgggcgcatgcaggtgggcgagttctcttcgatcatcggcctc
atcaagcgctcgcagcaactggtgggcacgctgttcaccgtgtcgggcgtgatcgcgatg
ttccgccgccgcgcggtgatcgacgtgggcttctggagccccgacgtgctcaccgaggac
atcgacatgagctggaagctgcagctcggcggctggaagctgcgcttcgagccgcgcgcg
ctgtgctggatcctgatgcccgagaccttgcgcggtctctggaagcagcgccagcgctgg
gccatcggcggcattcagaccatgctgcgcaacaccaccagcatcctgaagccgcgcaac
tggcgcatgtggctggtgtatgccgagtacatgaccagcgtcgtctgggcctatgcgatg
gcggcggtgctcgtggtcagcctggctcggcctttcctgccgatcgagtcggcctggcac
tccgcgctgctgccgcactggcagggcacgctgctggccatgacctgcatcctgcagatg
ctgctgagcctgtggatcgaccgccgctacgaccgcgacctgatgcgctatttcgcagga
acgatctggtacccgatcgctttctggactatcacgatggcgaccaccgtcatcgccctg
cccaaagccctgatacgccgccgcggcaagcgcgcggtgtggacgagccctgaccgagga
gtttccgatgccccatga
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