Variovorax sp. PMC12: C4F17_15690
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Entry
C4F17_15690 CDS
T05380
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_15690
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_15690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AVQ82282
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All DBs
Position
1:3369670..3372027
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AA seq
785 aa
AA seq
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MNYVKSRKHSPARYLSGRMATTATLVAIGSVSAHAQGTLNEVRVEASTDYKVEKSASPKF
TAPLLDTPKSVTVIPQEVIRQTGATTLVDALRTTPGITFGAGEGGNPVGDRPFIRGFDAQ
SDTYVDGLRDGAAQTREIFNVESVEVVKGPSSAFGGRGSAGGSVNIISKAPQAENFFSGT
IGLGTDSYQRETLDINRKISDSVAARLNLMNFKSDIAGRGPVNVKRWGVAPSVTFGMNSP
TQVTLSYYHYETNDLPDSGIPFNNPFTSGVYLNRNGDGQPISVPRGTYYGLVGRDYQRTK
VDAGTVDVKHDFGGGLVLRNVTRSSTSTNDYIWSQPDDSRGNFLVNGNVWRRPNNRASDS
ESLVNQTSLTGKFETAGIKHSFTTGIELGKEATTKGNYLFLQDAKTGFETYPRTGVSGLN
CAVGSGIRSNFNCTSALSPTPYDPWTGAITRSPAVTEVKTTTSSVYAFDTIEFNPQWSLN
LGLRWDDYKTRAVTPAYIAPIATTASVPSNALSGSTSVSVPAGRMVPGIELENKASFLNY
QVGAVYKPAPNGSIYVSYGTSSTPPGTDGGDGADGISAAIRNLKPQESRSLELGTKWEVL
DRRLVLTSAIFRTDMKNARVVAADGSTQNVGKKRVEGIEFGVAGSITRDWQVFGGYTHLN
AKLTDNGYTLSGTTYVASPFNGNMFPNTPKDSATLWTTYTVMPGLTIGGGATYVSKQYGN
VNNTKWIPSYVKYDAMVSYVVNKNLSLQLNVQNLTNKYYFDKAYASHYATVGAGRSASLT
ASFSF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtcaagagccgcaagcattcgcctgcgcgttacctttctggccgcatggcc
accaccgccacactggtcgccatcggctcggtgtccgcgcatgcccagggcacgctgaac
gaagtccgcgtcgaagcctcgaccgactacaaggtcgagaaatcggcctcgcccaagttc
acggcgccgctgctggacacgcccaagtcggtcaccgtcatcccgcaggaagtgatccgc
cagaccggcgcgaccacgctggtcgacgcgctgcgcaccacgcccggcatcaccttcggc
gccggcgaaggcggcaacccggtgggcgaccgcccgttcatccgcggcttcgatgcgcag
agcgacacctacgtggacggcttgcgcgacggcgcggcccagacgcgcgaaatcttcaac
gtggagtcggtcgaggtcgtgaagggaccgagttccgcgttcggcggacgcggctcggcc
ggcggctcggtgaacatcatcagcaaggcgccgcaggcggagaacttcttcagcggcacc
atcggcctgggcaccgattcctaccagcgcgagacgctggacatcaaccgcaagatctcc
gatagcgtcgcggcccgcctgaacctgatgaacttcaagtcggacatcgccgggcgcggt
ccggtcaacgtcaagcgctggggcgtggcgccgagcgtgaccttcggcatgaactcgccg
acgcaggtcacgctgagctactaccactacgagaccaacgacctgcccgactcgggcatc
cccttcaacaacccgttcacctcgggcgtgtacctgaaccgcaacggcgacggccagccc
atttcggtgccgcgcggcacctactacggcctggtgggccgcgactaccagcgcaccaag
gtcgacgccggcaccgtcgacgtgaagcacgacttcggcggcggcctggtgctgcgcaac
gtcacgcgctcgagcacctcgaccaacgactacatctggtcccagcccgacgacagccgc
ggcaacttcctggtcaacggcaacgtctggcgccggcccaacaaccgcgcgtcggactcc
gagtcgctggtcaaccagaccagcctgaccggcaaattcgagaccgccggcatcaagcac
agcttcaccaccggcatcgagctgggcaaggaagccaccaccaagggcaactacctgttc
ctgcaggacgcgaagaccggtttcgagacctacccgcgcacgggcgtgagcggcctgaac
tgcgccgtgggctcgggcatccgcagcaacttcaactgcacctcggcgctcagcccgacg
ccgtacgacccgtggaccggcgccatcaccaggtcgccggcggtgaccgaagtgaagacc
accaccagttcggtctacgccttcgacaccatcgagttcaacccgcagtggtcgctgaac
ctcggccttcgctgggacgactacaagacgcgcgcggtcacgccggcctacatcgcgccg
atcgcgaccacggcctccgtgcccagcaatgccctgagcggctcgaccagcgtgtccgtg
cccgccggccgcatggtcccgggcatcgagctcgagaacaaggcctcgttcctgaactac
caggtcggcgcggtctacaagccggcgcccaacggcagcatctatgtgtcctacggcacc
tcgtcgacgccgcccggcaccgacggcggcgacggcgccgacggcatcagcgcggccatc
cgcaacctgaagccgcaggaaagccgcagcctcgaactcggcaccaagtgggaagtgctg
gaccgccgcctggtgctgacctcggcgatcttccgcaccgacatgaagaacgcccgcgtg
gtcgcggccgacggctcgacgcagaacgtcggcaagaagcgggtggaaggcatcgagttc
ggcgtggccggcagcatcacccgcgactggcaggtgttcggcggctacacgcacctgaac
gccaagctcacggacaacggctacacgctgtcgggcacgacgtacgtcgcctcgccgttc
aacggcaacatgttcccgaacacgccgaaggacagcgcgacgctgtggaccacctacacg
gtgatgcccggcctcacgatcggcggcggcgccacctacgtgagcaagcagtacggcaac
gtcaacaacacgaagtggattccttcctacgtgaagtacgacgcgatggtgagctacgtg
gtcaacaagaacctcagcctgcagctgaacgtccagaacctgaccaacaagtactacttc
gacaaggcctatgcgtcgcactacgcgaccgtgggcgcgggccgctcggcctcgctgacc
gcatcgttctcgttctga
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