Variovorax sp. PMC12: C4F17_15820
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Entry
C4F17_15820 CDS
T05380
Symbol
tuf
Name
(GenBank) elongation factor Tu
KO
K02358
elongation factor Tu
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vam03012
]
C4F17_15820 (tuf)
03029 Mitochondrial biogenesis [BR:
vam03029
]
C4F17_15820 (tuf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_15820 (tuf)
Translation factors [BR:
vam03012
]
Eukaryotic type
Elongation factors
C4F17_15820 (tuf)
Prokaryotic type
C4F17_15820 (tuf)
Mitochondrial biogenesis [BR:
vam03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
C4F17_15820 (tuf)
Exosome [BR:
vam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C4F17_15820 (tuf)
Exosomal proteins of breast cancer cells
C4F17_15820 (tuf)
Exosomal proteins of colorectal cancer cells
C4F17_15820 (tuf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-ProteinID:
AVQ82302
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Position
1:complement(3410200..3411393)
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AA seq
397 aa
AA seq
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MAKGKFTRTKPHVNVGTIGHVDHGKTTLTAAIATVLSAKFGGEAKAYDQIDAAPEEKARG
ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI
LLARQVGVGYIIVFLNKCDMVDDKELLELVEMEVRELLDKYEFPGDDTPIIHGSAKLALE
GDKGELGEGAIMKLAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGAVERGVIK
VGEEIEIVGIRPTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVLCKPGS
IKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVS
ITVKLINPIAMEEGLRFAIREGGRTVGSGVVAKILDI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtaaattcacccgcaccaagcctcacgtcaacgtgggcacgatcggtcac
gtcgaccacggcaagaccacgctgacggctgcgatcgcaacggtgctgtcggccaagttc
ggcggcgaagccaaggcctacgaccagatcgacgctgcgcctgaagaaaaggcccgcggc
atcacgatcaacaccgcgcacgtcgagtacgaaacggccaaccgccactacgcacacgtc
gactgccccggccacgccgactacgtgaagaacatgatcaccggcgctgcccagatggac
ggcgccatcctggtgtgctcggccgccgacggcccgatgccccagacccgtgaacacatc
ctgctggctcgccaggtgggcgtgggctacatcatcgtgttcctgaacaagtgcgacatg
gtcgacgacaaggaactgctcgagctggtcgaaatggaagttcgcgaactcctcgacaag
tacgaattccccggcgacgacacccccatcatccacggctcggccaagctcgccctggaa
ggcgacaagggcgaactgggcgaaggcgccatcatgaagctggccgaagccctggacacg
tacatcccgacgcccgagcgcgccgtggacggcacgttcctgatgcccgtggaagacgtg
ttctcgatctcgggtcgcggcaccgtggtgaccggcgctgtcgagcgcggcgtgatcaag
gttggtgaagaaatcgaaatcgtgggcatccgcccgacggtcaagaccacctgcaccggc
gtggaaatgttccgcaagctgctggaccagggtcaagccggcgacaacgtgggcgtgctg
ctgcgcggcacgaagcgcgaagaagtcgagcgcggccaagtgctgtgcaagcccggctcg
atcaagccgcacacgcacttcaccgccgaggtgtatgtcctgtcgaaggacgaaggcggc
cgtcacacgccgttcttcaacaactatcgcccgcagttctacttccgcacgacggacgtg
accggcgcgatcgagctgcccaaggacaaggaaatggtcatgcccggcgacaacgtcagc
atcaccgtgaagctgatcaacccgatcgcgatggaagaaggcctgcgcttcgccatccgt
gaaggcggccgcaccgtgggttcgggcgtcgttgccaagatcctcgacatctaa
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