KEGG   Variovorax sp. PMC12: C4F17_15960
Entry
C4F17_15960       CDS       T05380                                 
Symbol
tssJ
Name
(GenBank) type VI secretion system lipoprotein TssJ
  KO
K11906  type VI secretion system protein VasD
Organism
vam  Variovorax sp. PMC12
Pathway
vam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4F17_15960 (tssJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_15960 (tssJ)
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_15960 (tssJ)
SSDB
Motif
Pfam: T6SS-SciN Fn3-like
Other DBs
NCBI-ProteinID: AVQ82323
LinkDB
Position
1:complement(3433595..3434107)
AA seq 170 aa
MRTLGTHHSSYESSCAALPRRRIAVLGLAAAGLSLIGCASKPVVTTVAVSLTAGPDANPD
ARGRASPLTVRVYALKSPGPFEGADFFSLFEKDQATLGAELVQREEVLLRPGESRKLDFN
LPPDAKAIGVMAAFRDLDRARWREVRPVTTGKAQSLDVLLGARQMRIDAK
NT seq 513 nt   +upstreamnt  +downstreamnt
atgcgcacgctgggtacacaccattcgtcctatgagagctcctgcgccgcgctgccgcgg
cgtcgcatcgccgttcttggccttgctgcagcgggtctttcgctcatcggatgcgcgagc
aagccggtggtgacgaccgtcgcggtctcgctcacggcgggccccgacgccaaccccgat
gcgcgcggacgcgcctcgccgctcacggtgcgcgtgtatgcgctgaagtcgcctggcccg
ttcgaaggcgccgacttcttctcgctgttcgagaaagaccaggccacgctgggcgccgaa
ctcgtgcagcgcgaagaagtgctgctgcggcccggcgaaagcagaaagctcgacttcaac
ctgccgcccgacgccaaggcgatcggcgtgatggcggcgttccgcgatctcgaccgcgcg
cgctggcgcgaggtgcgcccggtcaccaccggcaaggcgcagtcgctcgacgtgctgctc
ggcgcgcggcagatgcgcatcgacgcgaagtag

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