KEGG   Variovorax sp. PMC12: C4F17_16060
Entry
C4F17_16060       CDS       T05380                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vam  Variovorax sp. PMC12
Pathway
vam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4F17_16060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_16060
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_16060
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C
Other DBs
NCBI-ProteinID: AVQ82343
LinkDB
Position
1:complement(3454763..3457570)
AA seq 935 aa
MADNEFRIETDSPAKDDLMFWRIVGHEALARPSAYELTVLSKNKAIDAKDILGRAFDVVI
EFKDADGGTHERHCQGHAVRFVRTGHVGRHYEYRIALRSWFWLLTKRRNSRILQEKKVLE
VLDAVFEDSPIKRFKKTRADNVIGTHNPRRYCVQHQESDYGFLSRLLEDEGVYYWFDAHD
APGTMHLSDASDIAHEKLPANDTLHHMATDAAEARFNEVSRWVSGRQFDTGKHASRDSDF
KAIKKKLGADIDASDEHELATLEMFEFPGGYFTGDDGESRAKLRGDELNARRDRHWALTP
WPDAAAGRSFKFEGDPDGTRNGDYIIAACTFVASHRGYEGVSAGSAARPVQAALAEVLRD
DAVNADTLQVLEDLIAATPAMVAGQTGASAFLLTVMPAERPFRAPRLTPRPVMPGPQTAI
VVGPKGDELHVDDHGRVKVHFHWDRYDESNEKSTCWVRVSQPWGGKGWGGYFIPRIGQEV
IVDFLNGDPDRPVIVGRVYNDEQPIPYKSPTQSGFKTRSTPGGGPANYNEIMFEDKKGEE
NINIHAELDMSRSVERDDSTTIDRDQTVTVKRDQTSLVDRDRKSTVTRNDTNMVVVDQKN
TVKGNQNNQVVGNRTTFVDADDKTMVTGTSLSDVTGARTDTSRAGETRNVTGNQTITVSG
NLTYKAAKMSFEAGHIDWLVTGASSKYITVPSGPLGLMADKIKLVSNTKIEMMAVGDINA
TSIGSNTTVLGSNSSGYIGTNSEANMGVTRSTFIGMSIENALALAMANVLGVNIENTAGV
KLTNCAAPDIAAVAMDVKQSALHTFTPGAGGAGAGAAAVAGGLAAVAGAASAYVDIGATL
KQYADAADALGKAADDAHAEGLHSLEDRLRALAGKARNRRTDAILGLVPVMGLGLPLAEV
FSSDPSGTADLGKVNNAVEPDGSARPPEEREPEGD
NT seq 2808 nt   +upstreamnt  +downstreamnt
atggccgacaacgagttccgcatagagaccgactcccccgccaaggacgacctgatgttc
tggcgcatcgtcggccacgaagcactcgctcgcccgtcggcctacgaactcacggtgctg
tcgaagaacaaggccatcgacgccaaggacatcctcgggcgtgcattcgacgtcgtcatc
gaattcaaggacgcggacggcggcacccatgagcgccactgccagggccatgccgtgcgc
ttcgtgcgcacgggccacgtgggacggcactacgaataccgcatcgccctgcgctcctgg
ttctggctgctcaccaagcgcaggaactcgcgcatcctgcaggaaaagaaagtgctcgaa
gtgctcgatgccgtgttcgaggacagccccatcaagcgcttcaagaaaaccagggccgac
aacgtcatcggcacccacaacccgcgccgctactgcgtgcagcaccaggaaagcgactac
ggcttcctctcgcgcctgctggaggacgagggcgtgtactactggttcgacgcgcacgac
gcccccggcaccatgcacctgtcggacgccagcgacatcgcccacgagaagctgcccgcc
aacgacaccctgcaccacatggccaccgacgcggccgaggcgcgcttcaacgaagtgtcg
cgctgggtgagcgggcggcagttcgacaccggcaagcatgcgtcgcgcgacagcgacttc
aaggccataaagaaaaagctcggcgccgacatcgatgcatcggacgaacacgagctggcc
acgctcgagatgttcgagttccccggcggctacttcaccggcgacgacggggaaagccgc
gccaagctgcgcggcgacgaactcaatgcgcgccgcgatcgccactgggcgctgacgccg
tggcccgacgccgcagccggccgcagcttcaagttcgagggcgaccccgacggcacgcgc
aacggcgactacatcatcgcggcctgcaccttcgtcgccagccatcgcggctacgagggc
gtgagcgcgggctcggccgcgcggccggtgcaggcggcgctggccgaggtgctgcgcgac
gacgccgtcaacgccgacacgctgcaggtgctcgaggacctgatcgccgccacgcccgcg
atggtggccggacagaccggcgccagcgccttcctgctcaccgtgatgcccgccgagcgg
ccgttccgcgcgccgcgcctcacgccgcgcccggtcatgccgggcccgcagaccgccatc
gtggtcggacccaagggcgacgagttgcacgtggacgaccacggccgcgtgaaggtgcac
ttccactgggaccgctacgacgagagcaacgagaagtcgacctgctgggtgcgcgtgtcg
cagccctggggcggcaaaggctggggcggctatttcattccgcgcatcgggcaggaggtg
atcgtcgacttcctcaacggcgaccccgaccggccggtcatcgtcgggcgcgtctacaac
gacgagcagcccattccgtacaagtcgcccacgcagagcggcttcaagacccgctccacg
cccggcggcggtcccgcgaactacaacgagatcatgttcgaggacaagaagggcgaggag
aacatcaacatccacgccgagctcgacatgagccgcagcgtggagcgcgacgactcgacc
accatcgaccgcgaccagaccgtcaccgtcaagcgcgaccagaccagcctggtcgaccgc
gaccgcaagagcaccgtcacgcgtaacgacaccaacatggtggtggtcgaccagaagaac
accgtcaagggcaaccagaacaaccaggtggtgggcaaccgcaccaccttcgtcgacgcc
gacgacaagaccatggtcacgggcaccagcctgagcgacgtgaccggtgcgcgcaccgac
acctcgcgcgccggcgaaacccgcaacgtgaccggcaaccagaccatcaccgtcagcggg
aacctcacctacaaggcggcgaagatgagcttcgaggccggccacatcgactggctggtg
acgggcgcgagctccaagtacatcaccgtgcccagcggcccgctggggctgatggccgac
aagatcaagctggtgagcaacaccaagatcgagatgatggcggtgggcgacatcaacgcc
acctccatcggctcgaacaccacggtgctgggctccaattcgagcggctacatcggcacc
aacagcgaagccaacatgggcgtgacgcgctcgaccttcatcggcatgagcatcgagaac
gcgctggcgctggccatggccaacgtgctgggcgtgaacatcgagaacaccgcgggcgtg
aagctcaccaactgcgcggcgcccgacatcgcggcggtggcgatggatgtgaagcaatcg
gcgctgcacaccttcacaccgggggccggcggcgcgggcgccggggcagccgcggtggcc
ggcggactggccgcggtggcgggtgccgcctcggcctacgtcgacatcggcgccacgctc
aagcagtacgccgatgcggccgatgccctgggcaaggccgccgacgacgcgcatgccgaa
ggcctgcacagcctggaagaccggctgcgggcgctggcgggcaaggcccgcaaccggcgc
accgacgccatcctcgggctggtgccggtcatgggcctggggctgccgctcgcggaggtc
ttttccagcgaccccagcggcaccgccgacctgggcaaggtcaacaacgccgtcgagccc
gacggctcggcccggccgcccgaagagcgcgagcccgaaggcgactag

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