KEGG   Variovorax sp. PMC12: C4F17_16140
Entry
C4F17_16140       CDS       T05380                                 
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
  KO
K11893  type VI secretion system protein ImpJ
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_16140 (tssK)
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_16140 (tssK)
SSDB
Motif
Pfam: T6SS_VasE GHMP_kinases_C
Other DBs
NCBI-ProteinID: AVQ82358
LinkDB
Position
1:complement(3479620..3480951)
AA seq 443 aa
MSWRTKVVWSEGMLLQPQHLQQSERHADHARHVLLRATTPYAWGFAELEIDAAALTLGKL
ALVRAVGVFGDGTVFDMPAVDPLPEPIDIPAGMRDEAVVLALPLRRAGAREADAEDYEEL
VRHRVLESEVPDSNTAGERTAMLQLGQLHTRLMRAGEATDAWTTLGIARVQERRVDNQVL
LDRAMLPPLLDVAGHSVIRAWLDELLGLLRQRGEALAGRMTQGGTGGVAEIADFMLLQAV
NRNEAVFAHLARSAVLHPQHFFEHALGLAGDLASFRDSRRVARFGPYIHDDLATSFRPLM
DDLRRSLSMVLEQSAIRIELHDRKHGVRVAMVTDVELQRKATFVLAVNANMPSEALRARF
PTQVKIGPVERIRDLVNLALPGVTLTPMPVAPRQIPFHTGANYFELETRNSDLWRQLEQS
GGIAMHIAGDFPGLDLAFWAIRA
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgagctggcgaacaaaagtggtgtggagcgaggggatgctgctgcagcctcagcacctg
cagcaaagcgagcgccatgccgaccatgcgcggcatgtgctgctgcgcgcgaccacgccc
tatgcctggggttttgccgaactcgagatcgatgccgccgcgctcacgctcggcaagctc
gcgctggtgcgggcggtgggcgtgttcggcgacggcaccgtgttcgacatgccggcggtc
gacccgctgcccgagcccatcgacattcccgcaggcatgcgcgacgaggccgtggtgctc
gcgctgccgctgcgccgcgccggcgcgcgcgaggccgacgcggaagactacgaggagctg
gtgcgccaccgcgtgctcgagtcggaggtgcccgactccaacaccgccggcgagcgcacc
gccatgctgcagctgggccagctccacacgcggctgatgcgcgccggcgaggcgaccgac
gcctggaccacgctcggcatcgcccgcgtgcaggagcgccgcgtcgacaaccaggtgctg
ctggaccgcgcgatgctgccgccgctgctcgacgtggcgggccattcggtgatccgcgcc
tggctcgacgagctgctgggcctgctgcgccagcgcggcgaggcgcttgccggccgcatg
acgcagggcggcaccggcggcgtggccgagatcgccgacttcatgctgctgcaggccgtc
aaccgcaacgaggcggtgttcgcgcacctggccagaagcgcggtgctgcatccgcagcat
ttcttcgagcatgcgctcgggctggccggcgacctggcgagctttcgggattcacgccgc
gtggcgcgcttcgggccctacatccacgacgacctcgcgacgagcttccgcccgctcatg
gacgacctgcgccgcagcctgtcgatggtgctggagcagtcggcgatccgcatcgaactg
cacgaccgcaagcacggcgtgcgcgtggcgatggtgacggacgtggaactccagcgcaag
gcgaccttcgtgctcgcggtgaacgcgaacatgcccagcgaggcgctgcgcgcgcgcttt
cccacgcaggtcaagatcggcccggtggagcgcatccgcgacctcgtgaacctggcgctg
ccgggcgtcacgctcacgccgatgccggtcgcgccgcgccagattccgttccacacgggc
gccaactacttcgagctcgaaacacgcaacagcgacctgtggcgccagctcgagcagtcg
ggcggcatcgcgatgcacatcgcgggcgacttccccggcctcgaccttgccttctgggcg
atacgagcatga

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