Variovorax sp. PMC12: C4F17_16165
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Entry
C4F17_16165 CDS
T05380
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K20975
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_16165
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vam01001
]
C4F17_16165
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vam02022
]
C4F17_16165
Enzymes [BR:
vam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
C4F17_16165
Protein kinases [BR:
vam01001
]
Histidine kinases
Other
C4F17_16165
Two-component system [BR:
vam02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
C4F17_16165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
HAMP
HATPase_c_2
HPTransfase
Motif
Other DBs
NCBI-ProteinID:
AVQ82362
LinkDB
All DBs
Position
1:3486556..3488514
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AA seq
652 aa
AA seq
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MSTAARPSNGSAPEAAPAAAPPPPNHTLVVRGNLQNDLFRLGVVPCAAVALALTGWFTHS
RLQTLEAAFDAEGQAVARQVAAMSDLSLYAGDLPALQNVANAALRGGQVTRVEISNSAGV
FVTAGPKTTSLARLRMFTSPVTLREASRASAFAPAGSTAAGDTPIGLVQTFRDTTAYTRE
RSRSLIAGIGIAMVALIAAWASVRHMARTVARPLRRVSRTVAALETGQFDVRCGVVEGGT
RGTHELAVLAHDIDRLAERLQHNRQVSEERVREATAVALQRMAEAEQAALSRARFLAAAS
HDLRQPLHAMGLFIDGLLPGATPAQRPAVLRLQESTEFMGVLLDDLLEISRLDAQVLTPA
IAKVSLDALFDQIDAQHAAAAAQARVRLHWSDRGLAVRTDAAMLRRIVGNLVSNALRHAP
EGGTVLVAARRCAAGVRIEVRDNGVGIAPIHQGRIFEEFYQVANTERDRRRGFGLGLAIC
ARIATLLGTRITVRSALQAGSTFAFTLPAARAADAAPPEPPQFAPAPLAGLRCLVVDDDP
AILEGTRTLLAQWGCQADCVTTGAEAIARLGGGVRYDAVLCDLQLAGDDDGVNVLDAAKR
LQPDALAVLVSGATGPDVLQRLRQGGVMLLTKPVAPAKLRALLTTRRQVAAS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccgcgcggccctccaatggctcggcaccggaggcggcgcctgccgcagcg
ccgccgccgcccaaccacacgctggtggtgcgcggcaacctgcagaacgacctgttccgc
ctcggcgtggtgccgtgcgcggcggtggcgctggcgctgaccggctggttcacgcacagc
cggctgcagacgctggaggccgccttcgacgccgagggccaggcggtcgcaaggcaggtg
gcggccatgtccgacctgagcctgtatgcgggcgacctgcccgcgctgcagaacgtggcc
aacgccgcgctgcgcggcgggcaggtgacgcgggtggaaatcagcaacagcgcgggcgtg
ttcgtcaccgcggggcccaagaccacctcgctcgcacggctgcgcatgttcacctcgccg
gtcacgctgcgcgaggcctcgcgtgccagcgccttcgcgcccgcggggtccacggcggcg
ggcgacacgcccatcggcctggtgcagaccttccgcgacaccacggcctacacgcgcgag
cgcagccgctcgctcattgccggcatcggcatcgcgatggtggcgctgatcgcggcctgg
gcctcggtgcgccacatggcgcgcacggtggcgcggccgctgcggcgcgtgtcgcgcacc
gtcgccgcgctggagaccggccagttcgacgtgcgctgcggcgtggtcgagggcggcacg
cgcggcacgcacgagctggcggtgctggcgcacgacatcgaccggctcgccgagcggctg
cagcacaaccgccaggtcagcgaggagcgcgtgcgcgaggccaccgccgtggcgctgcag
cgcatggccgaggccgagcaggcggcgctgtcgcgcgcgcgcttcctggccgccgccagc
cacgacctgcgccagccgctgcatgccatgggcctgttcatcgacggcctgctgcccggc
gccacgccggcgcaacgcccggccgtgctgcggctgcaggagagcaccgagttcatgggc
gtgctgctcgacgacctgctggagatctcgcggctcgatgcgcaggtgctcacgccggcg
atcgccaaggtatcgctggacgcgctgttcgaccagatcgatgcacagcatgccgccgcg
gcggcgcaggcgcgcgtgcgcctgcactggagcgaccggggcctggcggtgcgcaccgac
gcggccatgctgcggcgcatcgtcggcaacctggtgagcaacgcgctgcgccatgcgccc
gaaggcggcaccgtgctggtggccgcgcggcgctgcgcggcgggcgtgcgcatcgaggtg
cgcgacaacggcgtgggcatcgcgcccatccaccagggccgcatcttcgaagagttctac
caggtggccaacaccgagcgcgaccgccgccgcggcttcgggctggggctggcgatctgc
gcgcgcatcgccacgctgctgggcacgcgcatcaccgtgcgctcggcgctgcaggccggc
agcaccttcgccttcaccctgcccgccgcgcgcgccgccgacgcggcgccgcccgagccg
ccgcagttcgcgcccgcgccgctggccggcctgcgctgcctggtggtggacgacgacccc
gccatcctcgaaggcacccgcacgctgctggcgcaatggggctgccaggccgactgcgtg
accaccggcgccgaggccatcgcgcggctgggcggcggcgtgcgctacgacgccgtgctg
tgcgacctgcagctggcgggcgacgacgacggcgtgaacgtgctcgacgccgccaagcgc
ctgcagcccgacgcgctcgcggtgctggtgtcgggcgcgaccgggcccgacgtgctgcag
cggctgcgccagggcggcgtgatgctgctgaccaagccggtggcgccggccaagctgcgc
gcgctgctcaccacgcggcggcaggttgcggcaagctga
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