Variovorax sp. PMC12: C4F17_16330
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Entry
C4F17_16330 CDS
T05380
Name
(GenBank) RNA methyltransferase
KO
K25137
23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.173
]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vam03009
]
C4F17_16330
Enzymes [BR:
vam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
C4F17_16330
Ribosome biogenesis [BR:
vam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C4F17_16330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
THUMP
RlmL_1st
MTS
Methyltransf_31
N6_Mtase
Methyltransf_25
AviRa
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AVQ82393
LinkDB
All DBs
Position
1:complement(3528026..3529255)
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AA seq
409 aa
AA seq
DB search
MNDLSFFLPCAAGVEEFLAQEVHALTGRAGQDLLTLRGGVRVRADWRDALKLNLHSRLAQ
RVLVELAHAPYRNENDLYAIANGVAWEIWFTPRQTFKIETTAQHSPLQSLNFATLRIKDA
IADRFRAKANGVRPSIETQWPDCRVFAHLTTDTCTLYIDTSGEPLFKRGWRQDKGDAPLK
ETLAAAMLAASGWWNPETGEVSAQPLYDPCCGSGTIAIEAAQIARGIAAGSLRRFGFEKL
LPFQAHVWTAIRKEAEAGARDHGVAIFGSDVSHRMVDFAERNAERAGVAQAVEFRGGDAL
QRMPPVEAGVIMLNPPYGERIEVGGVAGTGRFGARESAQTEQGDGGEFFPQLAAHWKKNY
AGWTAWVLTPDLKLPRQMRLKESRRVPMWNGPIECRLFRFDMVAGSARK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatctctcctttttcctgccttgcgccgccggcgtcgaggaattcctcgcccag
gaggtgcacgccctgaccggccgtgccgggcaagacctgctcacgctgcgcggcggcgtg
cgggtacgcgccgactggcgcgacgccctcaagctcaacctgcacagccggctcgcgcag
cgcgtgctggtcgagctggcccatgcgccctaccgcaatgaaaacgatctctacgccatc
gccaacggcgtggcctgggagatctggttcacccccaggcagactttcaagatcgagacc
acggcccagcacagcccgctgcagagcctgaatttcgccaccctgcgcatcaaggacgcc
attgccgaccgcttccgcgccaaggccaacggcgtgcgcccgagcatcgagacccagtgg
cccgactgccgcgtgttcgcccacctgaccaccgacacctgcacgctgtacatcgacacc
tcgggcgagccgctgttcaagcgcggctggcgccaggacaagggcgacgccccgctgaag
gaaaccctggccgccgccatgctggccgccagcggctggtggaaccccgagaccggggaa
gtgtcggcccagccgctctacgacccctgctgcggcagcggcaccatcgccatcgaggcg
gcgcagatcgcgcgcggcatcgcggccgggtcgctgcggcgcttcggcttcgagaagctg
ctgccgttccaggcgcatgtctggaccgccatcaggaaagaagccgaggccggcgcgcgg
gaccacggcgtcgccatcttcggctcggacgtgtcgcaccgcatggtcgactttgccgag
cgcaacgcggaacgcgcgggcgtggcgcaggccgtcgagttccgcggcggcgacgcgctg
cagcgcatgccgccggtcgaggccggcgtcatcatgctcaacccgccgtacggcgagcgc
atcgaggtgggcggggtggccggcaccggccgcttcggcgcccgcgaatcggcgcagacc
gagcagggcgacggcggtgagttctttccccagctcgcggcccactggaagaaaaactac
gccggctggaccgcctgggtgctcacgcccgacctgaagctgcccaggcagatgcgcctg
aaggagtcgcgccgcgtgccgatgtggaacggccccatcgaatgccggctgttccgcttc
gacatggtcgcgggctcagcgcggaagtga
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