Variovorax sp. PMC12: C4F17_16475
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Entry
C4F17_16475 CDS
T05380
Name
(GenBank) acetyl-CoA C-acyltransferase
KO
K00632
acetyl-CoA acyltransferase [EC:
2.3.1.16
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00071
Fatty acid degradation
vam00280
Valine, leucine and isoleucine degradation
vam00310
Lysine degradation
vam00362
Benzoate degradation
vam00380
Tryptophan metabolism
vam00592
alpha-Linolenic acid metabolism
vam00620
Pyruvate metabolism
vam00642
Ethylbenzene degradation
vam00650
Butanoate metabolism
vam00720
Other carbon fixation pathways
vam00907
Pinene, camphor and geraniol degradation
vam00984
Steroid degradation
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01212
Fatty acid metabolism
vam02020
Two-component system
Module
vam_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
C4F17_16475
00650 Butanoate metabolism
C4F17_16475
09102 Energy metabolism
00720 Other carbon fixation pathways
C4F17_16475
09103 Lipid metabolism
00071 Fatty acid degradation
C4F17_16475
00592 alpha-Linolenic acid metabolism
C4F17_16475
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C4F17_16475
00310 Lysine degradation
C4F17_16475
00380 Tryptophan metabolism
C4F17_16475
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C4F17_16475
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C4F17_16475
00642 Ethylbenzene degradation
C4F17_16475
00984 Steroid degradation
C4F17_16475
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_16475
Enzymes [BR:
vam01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
C4F17_16475
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
Thiolase_C_1
ketoacyl-synt
Motif
Other DBs
NCBI-ProteinID:
AVQ84661
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All DBs
Position
1:3557107..3558285
Genome browser
AA seq
392 aa
AA seq
DB search
MAEAYIVAAARTAGGRRGGKLAGWHPADLAAQVINALVARSGIDPAAVEDVILGCVSQVG
EQATNIARNAVLASKLPESVPGTSVDRQCGSSQQALHFAAQAVMSGSMDAVIAGGVESMT
RVPMFTPNALPAKAGLGTYMSPAMKARYPGVEFSQFTGAEMIARNYGIEKSALDRYALES
HHRAIAATRVGAFDDEIVPVDVLLADGTRGGEAHTVDEGIRFDATLEGIAGVKLIAEGGR
CTAATASQICDGASGVLVVNERGLKALGVKPLARIHHMSVMGHDPVIMLEAPLPATQRAL
KKAGMKIGDIDLYEVNEAFAPVPIAWLQALDADPARLNVNGGAIALGHPLGASGTKLMTT
LIHALAKRGKRYGLQTMCEGGGMANVTIVERL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcatacatcgtcgccgcggcgcgcacggccggcggacggcgcggcggcaag
ctcgcgggctggcacccggcggacctggcggcgcaggtgataaacgcgctggtggcacgc
agcggcatcgacccggcggcggtggaggacgtgatcctcggctgcgtgagccaggtgggc
gagcaggccaccaacatcgcgcgcaacgcggtgctggcgtcgaagctgcctgaatcggtg
ccgggcacatcggtcgaccggcaatgcggctcgtcgcagcaggcgctgcacttcgcggca
caggccgtgatgtcgggcagcatggacgcggtgatcgcgggcggcgtcgagagcatgacg
cgcgtgccgatgttcacgcccaacgcgctgcccgcgaaggcggggctgggcacctacatg
agccccgcgatgaaggcgcgctaccccggggttgaattcagccagttcaccggcgcggaa
atgatcgccaggaactacggcatcgagaaaagcgcgctcgaccgctacgcgctggagagc
caccaccgcgcgatcgccgcgacccgcgtgggcgcgttcgacgacgagatcgtgcccgtc
gacgtgctgctggccgacggcacccgcggcggcgaggcgcacacggtggacgaaggcatc
cgcttcgacgcgacgctcgaaggcatcgcgggcgtgaagctgatcgccgagggcggacgc
tgcaccgccgccacagcgagccagatctgcgacggcgcgagcggcgtgctggtggtgaac
gagcgcggcctgaaggcgctgggcgtgaagccgctggcgcgcatccaccacatgagcgtg
atggggcacgacccggtcatcatgctggaggccccgctgcccgcgacgcagcgcgcgctg
aagaaggccggcatgaagatcggcgacatcgacctgtacgaagtgaacgaagccttcgcg
cccgtgcccattgcatggctgcaggcgctcgacgccgacccggcgcggctcaacgtgaac
ggcggcgccatcgcgctgggccatccgctgggcgcctcgggcaccaagctcatgaccacg
ctgatccacgcgctggcgaagcgcggcaagcgctacggcctgcagaccatgtgcgaaggc
ggcggcatggccaacgtgaccatcgtggaaaggctttga
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