Variovorax sp. PMC12: C4F17_16580
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Entry
C4F17_16580 CDS
T05380
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00500
Starch and sucrose metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
Module
vam_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
vam_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
C4F17_16580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_16580
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
C4F17_16580
Exosome [BR:
vam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C4F17_16580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgB_N
CBM_48
Alpha-amylase_C
Alpha-amylase
AMPK1_CBM
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AVQ82436
LinkDB
All DBs
Position
1:3583764..3585938
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AA seq
724 aa
AA seq
DB search
MPPKPLSESEIHALMRAEHGDPFAVLGPHETAEGLEVRALLPGAQRVAVVHSRTGWPLSI
LSRHGESDLFSGLVPAAEARMGYSFQIDWDAHTSRLEDPYRFPFVLGDTDVWLLAEGTHL
RPWERLGAHLREMNGVKGVAFAVWAPNARRVSVVGNFNNWDGRRHMMRLRRECGVWEIFA
PHVTVGDAYEFEILSAHGEVLRKADPFAFSAQLRPDTACVVQPLPAAVKMPEGRAEANGR
HAPVSIYEVHLGSWRRKNNGHEWLDYRELADTLVPYARDMGFTHIELLPISEHPFDGSWG
YQPIGLYAPTSRFGTPGDFRHFVEAAHAAGLGVILDWVPAHFPTDAHGLGRFDGTALYEY
ADPREGFHNDWQTLIFNYARTEVRNYLVGNALYWLERYGVDGLRVDAVASMLYRDYSRKA
GEWIPNTFGGRENLEAIDFLRRMNRVVGVERPGAVTLAEESTSFPGVTRPPEDGGLGFHY
KWNMGWMNDTLAYAGTDPVYRKHHHQKITFGLMYAHSENFVLPLSHDEVVHGKGSLIGRM
PGDEWQKFAGLRNLYGYLWAYPGKKLLFMGGEFAQYAEWNADRSLDWHLLEHAAHQGVRR
LVRDLNNVYRHFPALHELDHDGGGFEWIVHDDADQSVFAFVRRARDGAFVVAVCNFTPVP
RRGYRLGVPFAGSYREIINTDGAVYGGSGVGNGVVESEPVAWHGKADSLSVSLPPLGTVM
WVLV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaagccgttgtccgaatcagaaatccacgcgctcatgcgcgccgaacatggc
gatccttttgccgtgctggggccgcacgagaccgccgagggcctggaggtgcgcgcgctt
ctgcccggcgcgcagcgcgtggcggtggtgcattcgcgcaccggctggccgctgtcgatc
ctttcgcgccacggcgagtcggacctcttcagcgggctggtgccggcggccgaggcccgc
atgggctattcgttccagatcgactgggacgcccacacctcgcggctcgaggacccctac
cgctttccgttcgtgctcggcgacaccgacgtctggctgctggccgagggcacgcacctg
cggccgtgggagcggctgggcgcgcacctgcgcgagatgaacggcgtcaagggcgtggcc
ttcgcggtctgggcgccgaatgcgcggcgcgtgtcggtggtcggcaacttcaacaactgg
gacggccggcgccacatgatgcggctgcgccgcgagtgcggcgtgtgggagatcttcgcg
ccgcacgtgacggtgggcgatgcctacgaattcgagattctttcggcccacggcgaagtg
ctgcgcaaggccgacccgttcgcgttctcggcgcagctgcggccggacaccgcctgcgtg
gtgcagccgctgccggccgccgtgaagatgcccgagggccgcgccgaggccaacggccgc
cacgcgcccgtcagcatttatgaagtgcaccttggctcgtggcgccgcaagaacaacggc
cacgagtggctcgactaccgcgagctggccgacacgctggtgccctatgcgcgcgacatg
ggcttcacgcacatcgagctgctgccgatcagcgagcacccgttcgacggctcctggggc
taccagccgatcggcctgtatgcgccgacctcgcgcttcggcacgccgggcgacttccgg
catttcgtcgaggccgcgcatgcggcggggctgggcgtgatcctcgactgggtgcccgcg
catttcccgaccgacgcgcacggcctgggccgcttcgacggcaccgcgctctatgagtac
gccgacccgcgcgagggcttccacaacgactggcagacgctgatcttcaactacgcgcgc
accgaggtgcgcaactacctcgtcggcaacgcgctctactggctggagcgctacggcgtg
gacggcctgcgcgtggacgcggtggcctcgatgctctaccgcgactacagccgcaaggcg
ggcgagtggatacccaacaccttcggcggacgcgagaacctcgaggccatcgacttcctg
cggcgcatgaaccgcgtggtgggcgtcgagcggcccggcgcggtgacgctggccgaagag
tcgaccagcttccccggcgtgacccgcccgcccgaagacggcggcctgggcttccactac
aagtggaacatgggctggatgaacgacaccctggcctatgcgggcaccgacccggtctac
cgcaagcaccaccaccagaagatcaccttcgggctgatgtatgcgcacagcgagaacttc
gtgctgccgctgtcgcacgacgaggtggtgcacggcaagggctcgctgatcgggcgcatg
ccgggagacgagtggcagaagtttgccgggctgcgcaacctgtatggctacctctgggcg
tatccgggcaagaagctgttgttcatggggggcgagttcgcgcagtacgccgaatggaac
gcggaccgcagcctggactggcatttgctggagcatgcggcgcaccaaggcgtgcggcgg
ctggtgcgcgacctgaacaacgtgtaccggcattttccggcgctgcacgagctcgaccat
gacggtggcggattcgagtggatcgtgcatgacgatgcggatcagtcggtgtttgccttt
gtccggcgggctcgtgacggggcgtttgttgtcgctgtctgcaacttcacgcctgtgcct
cggcgtgggtaccggttgggggttccgtttgctggctcttatcgggagatcatcaatacg
gatggggcggtttatggcgggagtggcgtggggaacggggttgtcgagagcgagcctgtt
gcttggcatgggaaagcggactccttgtctgtcagcttgccgcctttgggtactgtgatg
tgggtgttggtttga
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