Variovorax sp. PMC12: C4F17_16595
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Entry
C4F17_16595 CDS
T05380
Name
(GenBank) glycogen synthase GlgA
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00500
Starch and sucrose metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
Module
vam_M00565
Trehalose biosynthesis, D-glucose-1P => trehalose
vam_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
C4F17_16595
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vam01003
]
C4F17_16595
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
C4F17_16595
Glycosyltransferases [BR:
vam01003
]
Polysaccharide
Storage polysaccharide
C4F17_16595
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Pgp3_helical
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AVQ82439
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All DBs
Position
1:3590087..3591565
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AA seq
492 aa
AA seq
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MRILQVSAELFPLLKTGGLADIAGALPLALMAEGQDARVLLPGFPAIVRGVRELAPVAEF
DAPWGERFALRLGRVAVDGTPGIPAYVIDAPALYDRPGNPYEDNARQPYGDNHRRFALLG
WAAARLAQGLDPSWQPEVVHAHDWHAALAPAYLHFAREAGQMGASRVGSVFTVHNLAYQG
LFAPWNFADLGLPGPAFQMNGIEYHGQVSFMKGGLCYADRLTTVSPTYALEIQTPEQGCG
LDGLLRQRSGLLSGILNAVDDQVWNPATDAALVQGYHTPEGRHMAGKARCKSVLQHQLGL
AERPDAPLFILVSRLTEQKGLGLVLDGLDALLAQGGQLALLGSGEGWLEDAFRQRAAAAP
QSVSVTIGYDETLAHQLFGAGDVTLVPSLFEPCGLTQMYGLKYGSLPLVRRVGGLADTVV
DSTLEDLASGEATGFVFDRFDVADYERAVRRAFALYQRAPDWRRVRGNAMRRPADWGTAA
AQYIDVYRQALG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcctgcaagtcagcgccgaactctttcccctgctcaagaccggcggcctggcc
gacatcgccggcgccctgccgctggcgctcatggccgaggggcaggacgcgcgcgtgctg
ctgccgggctttccggccatcgtccgcggcgtgcgcgaactcgcgcccgtggccgagttc
gacgcgccctggggcgagcgattcgcgctgcggctcgggcgcgtggcggtcgacggcacg
ccgggcatcccggcctacgtgatcgatgcgcccgcgctctatgaccggcccggcaacccg
tacgaggacaacgcgcgccagccctacggcgacaaccaccggcgcttcgcgctgctgggc
tgggcggcggcgcggctcgcacaggggctcgatccatcctggcagcccgaggtggtgcac
gcgcacgactggcacgccgcgctggcgccggcctacctgcacttcgcgcgcgaggccggc
cagatgggcgcatcgcgcgtgggcagcgtgttcacggtgcacaacctggcctaccagggc
ctcttcgcgccatggaacttcgcggacctcgggctgcccgggcccgcgttccagatgaac
ggcatcgaataccacggccaggtctccttcatgaagggcggcctttgctacgccgaccgg
ctcaccacggtgagcccgacctacgcgctggagatccagacgcccgagcagggctgcggg
ctcgacggcctgctgcgccagcgcagcggcttgctgagcggcatcctcaacgcggtcgac
gaccaggtctggaacccggcgaccgatgcggcgctggtgcagggctaccacacgcccgaa
ggccgccacatggccggcaaggcgcgctgcaagtcggtgctgcagcaccagctggggctg
gccgagcggccggacgcgccgctgttcatcctggtgagccgcctgaccgagcagaagggc
ctggggctggtgctcgacggcctggacgcgctgctcgcgcaaggcggccagctcgcgctg
ctgggcagcggcgagggctggctcgaagacgcattcaggcagcgcgcggcggccgcgccg
caatcggtcagcgtgaccatcggctacgacgagacgctcgcgcaccagctcttcggcgcg
ggcgacgtgacgctggtgccctcgctcttcgagccctgcggcctcacgcagatgtacggc
ctgaaatacggcagcctgccgctggtgcgccgcgtgggcgggctggccgacacggtggtc
gacagcacgctggaagacctggccagcggcgaggccaccggtttcgtgttcgaccgcttc
gacgtggccgactacgaacgcgccgtgcgccgcgccttcgcgctctaccagcgcgcgccg
gactggcggcgcgtgcgcggcaacgcgatgcggcggccggccgactggggcactgcggct
gctcagtacatcgatgtctatcggcaggcgctgggatga
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