Variovorax sp. PMC12: C4F17_16600
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Entry
C4F17_16600 CDS
T05380
Name
(GenBank) glycogen phosphorylase
KO
K00688
glycogen phosphorylase [EC:
2.4.1.1
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00500
Starch and sucrose metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
Module
vam_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
C4F17_16600
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.1 glycogen phosphorylase
C4F17_16600
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Motif
Pfam:
Phosphorylase
Motif
Other DBs
NCBI-ProteinID:
AVQ82440
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Position
1:3591908..3594391
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AA seq
827 aa
AA seq
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MTIKDFAYDHPDRDVAAFKRAVANKLIYAVGKDPVAASQDDWLNATSQAVRDQLVERWMM
TTRANYAQDLKRVYYLSMEFLIGRTFTNALLAVDLYDTVREALADFGVDMDALAEREPDA
ALGNGGLGRLAACFLDSMATLGVPGMGYGIRYEYGMFRQRIVDGQQVETPDYWLTRGNPW
EFQRPEVNYRVRFGGHVQKREGANVPPGAVDWVDTHDVLAVAYDTIIPGYGTQATNTLRL
WSARATEEIDLSAFNRGNYMGAVESKNQSENVSRVLYPDDSTPSGRELRLHQEYFFCSAS
MQDLLRRYLRNHTTFDQLSEKVSIHLNDTHPVLAVPELMRLLLDEHGMPWDEAWAHTQKV
FSYTNHTLMHEALETWPVEMLGRILPRHLQIIYDINAKFLATVAQKLGNDVELMRRLSLV
DETGERRVRMAYVAVLASHSVNGVSGLHSELMKQSIFSDFAKLFPERFNNKTNGVTPRRW
LAQANPPLAALLDQRIGKGWRRDLSQLEALKPMAAQPAFVRAFRHAKRENKLRLANWVEQ
HLKVDIDTDAMFDVQVKRIHEYKRQLLNVLHVVARYHRILDAQATGAPVDMVPRVVVFAG
KAASAYVMAKLVIRLINDVAGTINADPRVGKLLKVVFLPNYSVSLAEIIMPAADLSEQIS
TAGTEASGTGNMKFALNGALTIGTLDGANVEMRENVGPENIFIFGNTTPEVADIRARGYQ
PRDIYEGNPELRRVLDAIRDGAFSPGEPGRYQGIYDALVNWGDHYLLLADYASYVAKQAE
VDALYRDSDAWTRMAILNVAGMGAFSSDRTIAQYAHEIWHTKPVVLG
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaaagacttcgcctacgaccatcccgaccgcgacgtcgcggccttcaagcgc
gcggtggccaacaagctgatctatgccgtcggcaaggaccctgtcgcggccagccaggac
gactggctcaacgccacctcgcaggccgtgcgcgatcagctcgtcgagcgctggatgatg
accacgcgcgccaactacgcgcaggacctcaagcgcgtctactacctgtcgatggaattc
ctcatcgggcgcaccttcaccaacgcgctgctggccgtggacctgtacgacaccgtgcgc
gaggcgctggccgatttcggcgtcgacatggacgcgctggccgagcgcgagcccgacgcg
gccctgggcaacggcggcctgggccggctcgccgcctgcttcctcgattcgatggccacg
ctcggcgtgccgggcatgggctacggcatccgctacgaatacggcatgttccgccagcgc
atcgtcgacggccagcaggtcgagacgcccgactactggctcacgcgcggcaacccctgg
gaattccagcggcccgaggtcaactaccgggtgcgcttcggcggccacgtgcagaagcgc
gagggcgccaacgtgccgcccggcgcggtcgactgggtcgacacccacgacgtgctggcc
gtggcctacgacaccatcattccgggctacggcacgcaggccaccaacacgctgcggctg
tggtcggcgcgcgccaccgaggaaatcgacctctcggccttcaaccgcggcaactacatg
ggcgcggtcgagagcaagaaccagtcggagaacgtctcgcgcgtgctctaccccgatgac
tccacgccctcggggcgcgagctgcggctgcaccaggagtacttcttctgcagcgccagc
atgcaggacctgctgcgccgctacctgcgcaaccacacgaccttcgaccagctctcggaa
aaagtcagcatccacctgaacgacacccacccggtgctcgccgtgcccgagctcatgcgg
ctgctgctggacgagcacggcatgccgtgggacgaagcctgggcgcacacgcagaaggtg
ttcagctacaccaaccacacgctgatgcacgaggcgctggagacctggccggtcgagatg
ctgggccgcatcctgccgcggcacctgcagatcatctacgacatcaacgcgaagttcctg
gccaccgtcgcgcagaagctgggcaacgacgtcgagctgatgcgcaggctctcgctggtg
gacgagaccggcgagcggcgcgtgcgcatggcctacgtggcggtgctggcgagccactcg
gtcaacggggtgtcggggctgcactcggagctgatgaagcagtcgatcttctcggacttc
gcgaagctctttcccgagcgcttcaacaacaagaccaatggcgtcacgccgcgccgctgg
ctggcgcaggccaacccgccgctggcggcgctgctcgaccagcgcatcggcaagggctgg
cggcgcgacctgtcgcaactggaggcgctgaagccgatggccgcgcagcccgccttcgtg
cgcgccttccgccatgccaagcgcgagaacaagctgcggctggccaactgggtcgagcag
cacctgaaggtggacatcgataccgacgcgatgttcgacgtgcaggtcaagcgcatccac
gaatacaagcggcagctgctcaacgtgctgcacgtggtggcgcgctaccaccgcatcctc
gacgcgcaggccacgggtgcgccggtcgacatggtgccgcgcgtggtggttttcgcgggc
aaggccgcttcggcctatgtgatggccaagctggtgatccggctcatcaacgacgtggcc
ggcaccatcaacgccgacccgcgcgtgggcaagctgctgaaggtggtgttcctgccgaac
tacagcgtgagtctggccgagatcatcatgccggcggccgacctgtcggagcagatctcc
acggcgggcaccgaggcctcgggcaccggcaacatgaagttcgcgctcaacggcgcgctg
accatcggcacgctggacggcgccaacgtggaaatgcgcgagaacgtggggccggagaac
atcttcatcttcggcaacaccacgcccgaggtcgccgacatccgcgcgcgcggctaccag
ccgcgcgacatctacgaaggcaaccccgagctcaggcgcgtgctcgacgcgatccgcgac
ggcgctttctcgccgggcgagccgggccgctaccagggcatctacgacgcgctggtgaac
tggggcgaccactacctgctgctagcggactatgcgagctacgtggcgaagcaggccgag
gtggatgcgctgtatcgcgattcggatgcgtggacgcggatggcgatcctgaacgtggcg
ggtatgggcgcgttttcatcggaccgcacgattgcgcagtacgcgcatgagatctggcac
accaagccggtcgtgctgggctga
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