Variovorax sp. PMC12: C4F17_16725
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Entry
C4F17_16725 CDS
T05380
Name
(GenBank) tRNA 2-thiouridine(34) synthase MnmA
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C4F17_16725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_16725
Enzymes [BR:
vam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
C4F17_16725
Transfer RNA biogenesis [BR:
vam03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
C4F17_16725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
Asn_synthase
QueC
ThiI
ATP_bind_3
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
AVQ82465
LinkDB
All DBs
Position
1:complement(3617456..3618565)
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AA seq
369 aa
AA seq
DB search
MAKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNIDFVDAASVA
DVLGIEIEHVNFAADYKDRVFAEFLREYKAGRTPNPDVLCNAEIKFKAFLDHAMRLGAEK
IATGHYARVRLNEATGRHELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELHKTEVRRI
AEEIGLPNAKKKDSTGICFIGERPFRDFLNRYISKEPGPIKDDRGRKLGEHQGLSFYTLG
QRQGLGIGGVKEKGAQRGSGDHSPWFVARKDVEKNTLWVVQGHDHPWLLSSELKADDASW
VSGEAPAAGSYGSKARYRQADAACEMGAGDGGNAAAFSLRFGEAQWAVTPGQSAVLYDGE
RCLGGGVIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaacggatcgtggtgggactgagcggcggggtggactccgcggtgactgcg
cacctgctcaagcagcaggggcacgaggtggtcggcatcttcatgaagaactgggaagac
gacgacgacagcgaatactgctcgtcgaacatcgacttcgtggatgcggccagcgtggca
gacgtgctgggcatcgagatcgagcacgtcaactttgcggccgactacaaagaccgcgtg
ttcgccgagttcctgcgcgaatacaaggcaggccgcacgcccaaccccgacgtgctgtgc
aacgccgagatcaagttcaaggcgtttctcgaccacgccatgcggctgggcgccgagaag
atcgccaccgggcactacgcgcgcgttcgcctgaacgaggccaccggcaggcacgagctg
ctgaagggactcgacccgtcgaaggaccagagctacttcctgcaccggctgaaccaggcc
cagctgtcgaagacgctgttcccggtgggcgaactgcacaagaccgaggtgcgccgcatc
gccgaggaaatcggcctgcctaatgcgaagaaaaaagactcgaccggcatctgcttcatc
ggcgagcggcctttccgcgatttcctcaaccgctacatctccaaggagccgggcccgatc
aaggacgatcgcggccgcaagctgggcgagcaccaggggctgagcttctacacgctgggg
cagcggcaggggctgggcatcggcggcgtgaaggagaagggcgcgcagaggggctcgggc
gaccattcgccctggttcgtggcgcgcaaggacgtcgagaagaacacgctgtgggtggtg
caggggcatgaccatccgtggctgctgtcgtcggaactgaaggcggacgatgcgagctgg
gtgtcgggcgaggcgcccgccgccgggagctacggctcgaaggcgcgctaccgccaggcc
gacgcggcctgcgagatgggtgcgggcgacggcggcaatgcggcggcgttcagcctgcgc
ttcggcgaggcgcaatgggccgtgacgccgggccagtcggccgtgctgtacgacggcgaa
cgctgcctgggcggcggcgtcatcgtctga
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