Variovorax sp. PMC12: C4F17_16845
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Entry
C4F17_16845 CDS
T05380
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_16845
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
GntR family
C4F17_16845
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Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_Crp_2
HTH_11
DUF6570
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AVQ82484
LinkDB
All DBs
Position
1:complement(3645806..3646561)
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AA seq
251 aa
AA seq
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MNSPTEISTVLDRGSESPLWAQFRDALRLQILQGVLPIGAKLPSEAELGEQFGISRIVVR
EALADLVRNNLIYKIKGRGAFVSARERDEDFVSTVLGFSDEMERKGRSVRTQILTQELRA
PTEQEAASLGLTDDTQVVALKRLRSVDGELRLLVETVVPADLAPGLHRTRLDDRSLYDVL
RRQYGLRLVRAERWIDAVLPDADTCELLNLPTPEPLLRIESIAYGANGRPLEHYRALHRC
KTSRLHVQTTT
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgaactctccgaccgaaatatcgaccgtgctcgaccgtggctccgaatcgcctttgtgg
gcgcagttccgcgacgcgctgcgcctgcagatcctgcagggcgtgctgcccatcggcgcc
aagctgccgtccgaagccgagctgggcgagcagttcggcatctcgcgcatcgtggtgcgc
gaggcgctggccgacctggtgcgcaacaacctcatctacaagatcaagggccgcggcgcc
ttcgtgtcggcacgcgagcgcgacgaagatttcgtctccaccgtgctcggcttctccgac
gagatggagcgcaagggccgctcggtgcgcacgcagatcctcacgcaggaactgcgcgcg
cccaccgaacaggaagcggcctccctcggcctcaccgacgacacgcaggtggtggcgctc
aagcgcctgcgcagcgtggacggcgaactgcgccttctggtggaaaccgtggtgcctgcc
gacctggcgccgggcctgcaccgcacgcgcctggacgaccgctctctgtacgacgtgctg
cgccgccagtacggcctgcgcctggtgcgcgccgaacgctggatcgacgcggtgctgccc
gacgccgacacctgcgagctgctgaacctgcccacgccggagccgctgctgcgcatcgag
tccatcgcctacggcgccaacggcaggccgctggagcactaccgcgcgctgcaccgctgc
aagaccagccggctgcacgtgcagacgacgacctga
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