KEGG   Variovorax sp. PMC12: C4F17_16860
Entry
C4F17_16860       CDS       T05380                                 
Name
(GenBank) transporter
  KO
K10439  ribose transport system substrate-binding protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02010  ABC transporters
vam02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C4F17_16860
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    C4F17_16860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_16860
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   Ribose transporter
    C4F17_16860
SSDB
Motif
Pfam: Peripla_BP_4 Peripla_BP_1
Other DBs
NCBI-ProteinID: AVQ82487
LinkDB
Position
1:3649992..3651038
AA seq 348 aa
MRRNFLKSAAAAGIGLAGASALAQQQAAAPAAGAGLRGNASDVYVMNVMVSGVEYWFPVY
EMMKQLGRTLGVKTRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAA
AMGIPVVTFAADSPNSKRTSFITSDNDREGTQAADAIAASMGGKGEYAVLENPGQDNHDR
RIAAFVNRMKTKHPGMKLVGRAASNQDPNKAYQAVLSLAQANPNLGALFMPEANSALGAA
QAKVETKKNIKVMCCDVNAKILDMIKSGDVFGSINPNQGMQGYMGMMMLFLAKNPTLIDP
MNDAKRNGTNPMSVPFLDNGLAVVSKANADDFYWDKYLARRGTKGIGE
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgaggcgtaatttcctgaagtccgcggcggccgccggtatcggcctggccggtgcgagc
gcgcttgcgcagcagcaagcggcagcccccgccgcgggcgccggcctgcgcggcaacgcc
agcgacgtctacgtgatgaacgtgatggtgtcgggcgtggagtactggtttccggtctac
gaaatgatgaagcagctcggccgcacgctgggcgtgaagacgcgctacaccggcacgccc
gagtacgacgtgaacaagcagctcgcgtccttcgagcaggaactggcgcgcaagccagcc
ggcatcctgctgcatccgatgaaccccgacccgttcatagagcccatcaaccgcgcggcg
gcgatgggcatccccgtcgtcaccttcgcggcagactcgcccaactccaagcgcacctcg
ttcatcacgtccgacaacgaccgcgaaggcacgcaggcggcggacgccatcgcggcttcg
atgggcggcaagggcgaatacgccgtgctggagaaccccggccaggacaaccacgaccgc
cgcatcgccgccttcgtcaaccgcatgaagaccaagcacccgggcatgaagctggtcggc
cgcgccgccagcaaccaggacccgaacaaggcctaccaggccgtgctgagcctggcgcag
gccaacccgaacctgggcgccctgttcatgcccgaggccaactcggcgctgggcgcggcg
caggccaaggtcgagaccaagaagaacatcaaggtgatgtgctgcgacgtgaacgccaag
atcctggacatgatcaagtcgggcgacgtgttcggctccatcaacccgaaccagggcatg
cagggctacatgggcatgatgatgctgtttctggccaagaacccgacgctcatcgacccg
atgaacgacgccaagcgcaacggcaccaacccgatgtccgtgcccttcctggacaacggc
ctggccgtggtcagcaaggccaacgcggacgacttctactgggacaagtacctcgcccgc
cgcggcaccaagggaatcggcgagtga

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