Variovorax sp. PMC12: C4F17_16870
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Entry
C4F17_16870 CDS
T05380
Name
(GenBank) ABC transporter permease
KO
K10440
ribose transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_16870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_16870
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
C4F17_16870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AVQ82489
LinkDB
All DBs
Position
1:3652555..3653583
Genome browser
AA seq
342 aa
AA seq
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MNYPAQLDAGAAPGLQPHQSGGGPAKPASKLGSMREMGLLLIIAALCVGMSFASPYFLTW
DNVRAMLLSFSIEGIVVVGMTILLIVGGIDLSVGSVVCFAMVVTGKLFLMGFDPWTAGLV
AIGASALIGAMIGGCVTRIGLNHFIASLAFMVIVRGLCLALTQGTPQSLFSLPAEFKFIG
QGTLFGIPAVILIFLLIVVVSDFVLRRYTLLRRVFYTGSNEKAALYSGIRVGHVKFWVTV
LCSASAGLAGVIYTARFGAATPTFGMGMELNVIAAAVIGGASLKGGSGTVLGAVLGLALL
SVVTSSLILLDVSPYWQDVIKGLILLAAVTIDHIMNTRKTKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaactacccggcacaactcgacgcgggggccgcaccgggcctccagccacaccagtcg
gggggcggccccgccaagcccgccagcaagctcggcagcatgcgcgagatgggcctgctg
ctcatcatcgccgcgctgtgcgtgggcatgagcttcgcgtcgccctacttcctcacgtgg
gacaacgtgcgcgcgatgctgctgtcgttctccatcgaaggcatcgtggtggtgggcatg
acgatcctgctgatcgtcggcggcatcgacctgtcggtgggctcggtggtgtgcttcgcg
atggtggtcacgggcaagctgttcctcatgggcttcgatccgtggacggcggggctggtg
gccatcggcgcgagcgcgctcatcggcgccatgatcggcggctgcgtcacgcgcatcggg
ctgaaccatttcatcgcctcgctggccttcatggtgatcgtgcgcggcctgtgcctggcg
ctcacgcagggcacgccgcagtcgctgttctcgctgccggcggagttcaagttcatcggc
cagggcacgctgttcggcattccggccgtcatcctgatcttcctgctcatcgtggtggtg
agcgacttcgtgctgcgccgctacaccctgctgcgccgcgtgttctacaccggcagcaac
gagaaggccgcgctgtactcgggcattcgcgtgggccacgtgaagttctgggtcacggtg
ctgtgctccgcttcggcgggcctggccggcgtgatctacaccgcgcgcttcggcgcggcc
acgcccaccttcggcatgggcatggagctgaacgtgatcgccgccgcggtgatcggcggc
gccagcctcaagggcggctcgggcacggtgctgggcgcggtgctgggcctggcgctgctg
tcggtggtgaccagctcgctgatcctgctggacgtgtcgccctactggcaggacgtgatc
aagggcctgatcctgctcgcggccgtgaccatcgaccacatcatgaacaccagaaagacc
aagcgatga
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