Variovorax sp. PMC12: C4F17_16950
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Entry
C4F17_16950 CDS
T05380
Symbol
livF
Name
(GenBank) branched-chain amino acid ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_16950 (livF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_16950 (livF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_16950 (livF)
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_16950 (livF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
BCA_ABC_TP_C
AAA_23
SMC_N
AAA_29
AAA_19
AAA_30
AAA_27
SRP54
Zeta_toxin
RsgA_GTPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AVQ84671
LinkDB
All DBs
Position
1:complement(3672374..3673093)
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AA seq
239 aa
AA seq
DB search
MAEALLSLRAISAAYGRIQALCDVSVDVPEGEIVALLGSNGAGKTTTLNCISNLVACTEG
EVRLDGERIDRLGSDALVKRGIVQVPEGRQVFRDMSVRENLDLGAYLRRDRAGIRNDLES
VYAMFPRLKERQHQMAATLSGGEQQMLAIGRAVMARPRVMLFDEPSMGLSPLLVEQMFGI
IERLHREQKITILLVEQNVQLALAVSSYGYILENGEISLHGPAAQLANDEAVRRAYLGV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcactgttgtccctgcgcgccatctcggccgcctacggccgcatccaggcg
ctgtgcgacgtgtcggtcgacgtgccggagggcgagatcgtcgcgctgctcggcagcaac
ggcgcaggcaagaccaccacgctgaactgcatctcgaacctggtcgcctgcaccgagggc
gaggtgcggctcgacggcgaacgcatcgaccggctgggctccgacgcgctggtcaagcgc
ggcatcgtgcaggtgcccgaaggccgccaggtgttccgcgacatgagcgtgcgcgagaac
ctcgacctcggtgcctacctgcggcgcgaccgcgcgggcatccgcaacgacctggagtcg
gtctacgcgatgttcccgcgcctgaaggagcgccagcaccagatggccgccaccttgtcg
ggcggcgagcagcagatgctggccatcggccgcgcggtgatggcgcgcccgcgcgtgatg
ctgttcgacgaaccgtcgatgggcctgtcgccgctgctggtggagcagatgttcgggatc
atcgagcgcctgcaccgcgaacagaagatcacgatcctgctggtcgagcagaacgtgcag
ctcgcgctggcggtgtcgagctacggctacatcctggagaacggcgagatctcgttgcac
ggtcccgccgcacaactggcaaacgacgaagcggtgcgccgcgcctacctcggcgtctga
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