Variovorax sp. PMC12: C4F17_17135
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Entry
C4F17_17135 CDS
T05380
Name
(GenBank) acyl-CoA dehydrogenase
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00071
Fatty acid degradation
vam00280
Valine, leucine and isoleucine degradation
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01212
Fatty acid metabolism
Module
vam_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
C4F17_17135
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C4F17_17135
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
C4F17_17135
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Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
ACOX_C_alpha1
Spectrin
Motif
Other DBs
NCBI-ProteinID:
AVQ82537
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Position
1:3711317..3712492
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AA seq
391 aa
AA seq
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MDAELQADRAALADTVRRFADNEIAPNVQAWDDAGEFPRALYARAAELGLLGLGYPEALG
GTPASYALKLPAWVALARHGRSGGVLASLFSHNIGLPPVVLHGSEAVRQEVVPPVLRGEK
IAALAITEPGGGSDVAALRTTARRVPDGDGDHYVVNGEKTFITSGMRADWITVAARTGEG
RGAGGISMLLVPGDAPGLSRTRLSKMGWLCSDTATLHFDDVHVPARYLLGNEGEGFRMVM
GNFNGERIGLAAGALGFAQACLDEALAWARERRAFGAALIEHQAVRHKLVDMQMRIASTE
AWIEAVSAEGDALEAAGRFNAPEWVAQICLLKNHATQTMQFCADQAVQILGGMGFMRGTV
SERIYREVKVMMIGGGAEDVMKELAARQLGW
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgaactgcaggccgaccgcgcggcgctcgccgacaccgtgcggcgcttcgcc
gacaacgagatcgcaccgaacgtgcaggcgtgggacgacgcgggcgagtttccgcgtgcg
ctgtacgcgcgcgccgccgaactgggcctgctcgggctgggctaccccgaagcgctgggt
ggcacgcccgcctcgtatgcgctcaagctgccggcatgggtcgcgctcgcgcgccacggc
aggagcggcggcgtgctcgcgagcctgttctcgcacaacatcggcctgccgccggtggtg
ctgcacggcagcgaagcggtgcgccaggaagtggtgccgccggtgctgcgcggcgagaag
atcgcggcgctggccatcaccgagcccggcggcggctccgacgtggccgcgctgcgcacc
acggctcggcgagtcccggacggcgatggcgaccactacgtggtgaacggcgagaagact
ttcatcacctcgggcatgcgcgccgactggatcaccgtggcggcccgcaccggcgaagga
cgcggcgcgggcggcatctcgatgctgctggtgccgggcgatgcaccgggcctctcgcgc
acgcgcctgtcgaagatgggctggctgtgctccgacaccgccacgctgcacttcgacgac
gtgcacgtgcccgcgcgctaccttcttgggaacgagggcgaaggcttccgcatggtcatg
ggcaacttcaacggcgagcgcatcggcctcgcggcgggcgcgctgggcttcgcgcaggcc
tgcctcgacgaggcgctggcctgggcgcgcgaacgcagggctttcggtgccgcgctcatc
gaacatcaggcggtacgccacaagctggtcgacatgcagatgcgcatcgcctccaccgag
gcctggatcgaggcggtgtcggccgagggcgatgcgctggaggccgccgggcgcttcaac
gcccccgaatgggtggcgcagatctgcctgctgaagaaccacgccacgcagaccatgcag
ttctgcgccgaccaggcggtgcagatcctgggcggcatgggcttcatgcgcggcacggtc
agcgagcgcatctaccgcgaggtgaaggtgatgatgatcggcgggggtgccgaggacgtc
atgaaggagctggcggcgaggcagctgggctggtag
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