Variovorax sp. PMC12: C4F17_17220
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Entry
C4F17_17220 CDS
T05380
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_17220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_17220
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C4F17_17220
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Ortholog
Paralog
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GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AVQ82553
LinkDB
All DBs
Position
1:3727386..3728246
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AA seq
286 aa
AA seq
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MSASKSKATPWWLSGPALLLFTALLLVPLALTAVLSFNVYDPATGPKSGEFTLAHYALVF
SDSYYLGIFWRTFWVSALVTVICVVVGAPEAYVLSRMRNPWRSVLLLVVLAPLLVSVVVR
AFGWSMLLGPEGAVNGLLGLVGIGPVKILYTNAAVIIALVHVMLPFMVIPVWTSLQKLDP
GVENAALSLNATPFTTLRRIVLPQVMPGILSGSLIVFGLAASSFAIPGLLGGRRLKMVAT
IVYDEYLSELNWPLGAAVALVLLVANLVVMLSYNRLVEGRYKKALG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcgaagagcaaggccaccccgtggtggctctccggcccggcgctgctgctg
ttcaccgcgctgctgctggtgccgctcgcgctcactgccgtgctgtcgttcaacgtgtac
gacccggccaccggccccaagtcgggcgagttcacgctcgcgcactacgcgctggtgttc
tccgattcgtactacctcggcatcttctggcgcaccttctgggtctcggcgctggtcacg
gtgatctgcgtggtggtcggcgcgcccgaggcctatgtgctcagccgcatgcgcaacccg
tggcgctcggtgctgctgctggtggtgctggcgccgctgctggtgtcggtggtagtgcgg
gccttcggctggagcatgctgctgggccccgagggcgcggtgaacgggctgctgggcctc
gtcggcatcgggccggtgaagatcctctacaccaacgcggccgtgatcatcgcgctggtg
cacgtgatgctgcccttcatggtgatcccggtgtggacatcgctgcagaagctggaccca
ggcgtggagaacgcggcgctgtcgctcaacgccacgcccttcaccacgctgcggcgcatc
gtgctgccgcaggtgatgcccggcattctttccggcagcctgatcgtgttcggcctggcc
gcgagctcgttcgccattccggggctgctgggcgggcggcggctgaagatggtcgcgacc
atcgtgtacgacgaatacctgagcgagctcaactggccgctgggtgctgccgtggcactc
gtgttgctggtggctaacctggtggtgatgctcagctacaaccgcctcgtagaaggccgc
tacaagaaagcgctgggctga
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