Variovorax sp. PMC12: C4F17_17255
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Entry
C4F17_17255 CDS
T05380
Name
(GenBank) TetR family transcriptional regulator
KO
K18476
TetR/AcrR family transcriptional regulator, tetracycline repressor protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_17255
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4F17_17255
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_1
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AVQ82559
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All DBs
Position
1:3734282..3734968
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AA seq
228 aa
AA seq
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MKLDREVILETALGLLDEVGMDKLSTRLLAERLGVQQPALYWHFRNKRALLDAMNSELLR
RAHKRQLPLPDESWETFLRENARSFRRALLARRDGARLHAGTEPDPGDLEMVEAQLAAVV
DRGVPATQAMTLLIALGRYTVGCVLEEQAAPPDAEARQQALDASAASRPLLAEAFASYRE
AGPDAMFDIGVDLMIEGAKARLDNIEAAGASPAPRRKSSRRPSPPSSA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggaccgcgaagtgatcctcgagaccgccctggggctgctcgacgaggtcgga
atggacaagctcagcacccggctgctggccgagcggctgggcgtgcagcagccggcgctg
tactggcatttcaggaacaagcgggcgctgctcgatgcgatgaacagcgaactgctgcgc
cgcgcccacaagcggcagctgccgctgcccgacgaatcgtgggaaaccttcctgcgcgag
aacgcgcgcagcttccggcgcgcgctgctggcgcggcgcgacggcgcgcggctgcacgcg
ggcaccgagcccgatccgggcgacctggaaatggtggaggcccagctggcggccgtggtc
gaccgcggcgtgccggcaacgcaggccatgacgctgctgatcgcgctgggccgctacacg
gtgggctgcgtgctggaggaacaggcggcgccgcccgacgccgaggcgcgccagcaggcg
ctcgatgcctccgcggcctcgcgcccgctgctggccgaagccttcgcgagctaccgcgag
gcgggcccggatgcgatgttcgacatcggcgtggacctgatgatcgagggcgcgaaggcg
cgcctcgacaacatcgaggcggccggggctagtcctgcgcctcgccgcaaatccagccgg
cggccttctccgccatcatcagcgtag
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