Variovorax sp. PMC12: C4F17_17280
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Entry
C4F17_17280 CDS
T05380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02065
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_17280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_17280
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
C4F17_17280
Phospholipid transporter
C4F17_17280
Mce system transporter
C4F17_17280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
AAA_25
AAA_22
ABC_ATPase
SMC_N
NB-ARC
AAA_19
MobB
RsgA_GTPase
ATP-synt_ab
TsaE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AVQ82564
LinkDB
All DBs
Position
1:3740540..3741385
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AA seq
281 aa
AA seq
DB search
MSMPVRPDTDQTVVDIRGLWTVFKNADGEQVVHRDLRLHIDRGEVLSLVGGSGTGKTVLL
RQILGLEKPTRGHVEVLGQEPGELSASGAANVGMLFQHGALFSAFSVLENIAFPLRELKL
LPDELIRHAALVKLQMVGLEPRHANMSPSDLSGGMIKRVALARALIMDPPLLLLDEPTAG
LDPEASDSFCNLLRGLHRELGLTVVMVTHDLDTLFDLSTRIAVLADQKVIVTGAAREVIA
YPHPFIHEYFLGGRGQRALEALHDKPADATLASQPAAEAGR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcccgtgcgccccgacaccgaccagaccgtggtggacatccgcggcctgtgg
acggtgttcaagaacgccgacggcgagcaggtggtgcatcgcgacctgcggctgcacatc
gaccgcggcgaggtgctgtcgctggtcggcggttcgggcaccggcaagacggtgctgctg
cgccagatcctcgggctggaaaagcccacgcgcggccatgtcgaggtgctgggccaggag
cccggcgaactcagcgcctcgggcgcggccaacgtgggcatgctgttccagcacggcgcg
ctgttctcggccttcagcgtgctggagaacatcgcgtttccgctgcgcgagctgaagctg
ctgcccgacgagctgatccgccatgcggcgctggtgaagctgcagatggtgggcctggag
ccccggcacgccaacatgagcccgtcggacctgtcgggcggcatgatcaagcgcgtggcg
ctggcgcgcgcgctcatcatggacccgccgctgctgctgctggacgagcccacggccggc
ctcgaccccgaggcctccgacagcttctgcaacctgctgcgcggcctgcaccgcgagctg
ggcctgacggtggtgatggtcacgcacgacctggacacgctgttcgatctgagcacccgc
atcgcggtgctggcagaccagaaggtgatcgtcaccggcgcggcgcgcgaggtcatcgcg
tatccgcatccgttcatccacgaatattttctcggcgggcgcgggcagcgcgccctggag
gccctgcacgacaagcccgccgacgcaactctcgcatcgcagcccgccgcggaggcgggc
cgctga
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integrated database retrieval system
