Variovorax sp. PMC12: C4F17_17415
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Entry
C4F17_17415 CDS
T05380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_17415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_17415
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
C4F17_17415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_29
AAA_27
RsgA_GTPase
AAA_16
AAA_30
AAA_23
SMC_N
TsaE
Motif
Other DBs
NCBI-ProteinID:
AVQ82590
LinkDB
All DBs
Position
1:complement(3767140..3768726)
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AA seq
528 aa
AA seq
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MSATSPNAIGGLPAGKGALALDTYELTKRFGAFTAMDRVTMRVEPGTVHALLGENGAGKS
TLVKCVAGFQRAEEGSILIDGREQDIANPIVARALGIGMVYQHFTLAPGMTVAENLLLAG
GKTPALIDWKTKRAELKEFLATTPFSLDLDVRPSELAAGEKQKLELLKQLYLKPRLLILD
EPTSVLTPQEADEVLGHVREFARSGLCTVLIITHKFREVMAYADSVTVLRRGKAVHHCRV
ADTSPAQLAQAMMGGEQATASTPIARKPVPANAPVALKVEGLKAQGDRGTLALHDLSLSV
RAGEILGVAGVSGNGQRELVEALVGQRPRLAGKVTVMGQPYGAHRAENRKLKVRSLPEEP
LRNACVGDLSVAENMALRDFDQPPLSRGGVLSFPYWRSRAREWIAEYGVKTQGEGAPIRS
LSGGNVQRAVLARELAGDINVLIAANPVFGLDFAAVAEIHSRIVQVREKGGAVLLISEDL
DELLELADRIVVMSEGQIVFETPAAGAERHVIGAHMGGGHHEPLKTAA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccacatcacctaacgcaatcggtggcctccccgcaggcaaaggcgcgctcgcg
ctggacacctacgagctcaccaaacgcttcggcgccttcaccgccatggaccgcgtgacc
atgcgcgtcgagcccggcaccgtgcacgcgctgctcggcgagaacggcgcgggaaagagc
accctggtgaagtgcgtggccggcttccagcgcgcggaggagggcagcatcctgatcgac
ggacgcgagcaggacatcgccaaccccatcgtggcgcgcgcgctgggcatcggcatggtg
taccagcatttcacgctggcgccgggcatgacggtggcggaaaacctgctgctcgcgggt
ggcaagacgccggcgctgatcgactggaagacgaagcgcgcggagctgaaggaatttctt
gcgaccacgccgttcagcctcgacctcgatgtgcgtccgtccgagcttgcggccggcgag
aagcagaagctcgaactgctcaagcagctgtacctgaagccgcgcctgctgatcctcgac
gagccgacctcggtgctcacgccgcaggaggccgacgaggtgctgggccacgtacgcgag
ttcgcgcgcagcgggctgtgcacggtgctcatcatcacgcacaagttccgcgaggtgatg
gcgtatgccgacagcgtcaccgtgctgcggcggggcaaggcggtgcatcactgccgcgtg
gccgacaccagcccggcgcagctggcgcaggccatgatgggtggcgagcaggcaacggca
tcgacgccgatcgcgaggaagcccgtgcccgccaatgcgccggttgcattgaaggtcgaa
ggactcaaggcgcaaggtgatcgcggcacgctggcgctgcacgacctgagcctgtccgtg
cgcgcgggagagatccttggcgtggccggtgtgtccggcaacgggcagcgcgaacttgtg
gaggccctcgtcggccagcgtccgcgccttgcgggcaaggtcacggtgatggggcagccc
tacggtgcgcaccgcgccgagaaccgcaagctcaaggtccgcagcctcccggaagagccg
ctgcgcaacgcctgtgtcggcgacctcagcgttgccgagaacatggcgctgcgtgatttc
gaccaaccgcctttgtcgcgcggcggcgtgctgagctttccgtactggcgcagccgggca
cgcgaatggatcgccgagtacggcgtgaagacccagggcgagggcgcgccgattcgcagc
ctctcgggcggcaacgtgcagcgcgcggtgctggcgcgggagctggccggcgacatcaac
gtgctgatcgccgcgaaccccgtgttcggcctcgacttcgcggccgtcgccgaaatccac
tcgcgcatcgtgcaggtgcgcgagaagggcggagcggtgctgctgatcagcgaagacctc
gacgaactgctcgaactggcggaccgcatcgtcgtgatgagcgaaggccagatcgtgttc
gagacgccggctgccggagccgaacggcatgtgatcggggcgcacatgggcggcgggcac
cacgagccgttgaagacagcggcatga
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