Variovorax sp. PMC12: C4F17_17595
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Entry
C4F17_17595 CDS
T05380
Name
(GenBank) 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
KO
K05921
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:
4.1.1.68
5.3.3.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00350
Tyrosine metabolism
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
C4F17_17595
Enzymes [BR:
vam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.68 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
C4F17_17595
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Motif
Pfam:
FAA_hydrolase
Motif
Other DBs
NCBI-ProteinID:
AVQ82624
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All DBs
Position
1:3805033..3805815
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AA seq
260 aa
AA seq
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MKHARVIFEGREHTGTAHELNGQQDAAVRLEDGRIVPQEQLTWLPPLAPTARPRTILALG
LNYADHARELEFKAPEEPLVFVKGQSALIGHRQHTHRPADVQFMHYECELAIVVGKTAKN
VKRDDAYDFIGGYTVANDYAIRDYLENWYRPNLRVKNRDTCTPLGPWFVDAADVPDPMAL
ALRTTVNGTVTQQGNTRDMIFDAPFLIEYFSRFMTLSPGDLILTGTPDGVVDCKPGDVVV
TEIERIGALMNTIETIQGKT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgcacgcgtcatcttcgagggccgagaacacaccggcaccgcccacgaactg
aacggccagcaggacgccgccgtgcgcctggaagacggccgcatcgtgccgcaggagcag
ctcacctggctgccgccgctcgcgcccacggcgcgcccgcgcaccatcctcgcgctgggc
ctgaactacgccgaccacgccagggaactcgagttcaaggcgcccgaggaaccgctggtg
ttcgtcaagggccagagcgcgctcatcggccaccgccagcacacgcatcgtccggccgac
gtgcagttcatgcactacgaatgcgagctggccatcgtggtcggcaagaccgcgaagaac
gtgaagcgcgacgacgcctacgacttcatcggcggctacaccgtggccaacgactacgcc
attcgcgactacctcgagaactggtaccgccccaacctgcgcgtgaagaaccgcgacacc
tgcacgccgctgggcccgtggttcgtcgatgcggccgacgtgcccgaccccatggcgctc
gcgctgcgcaccaccgtcaacggcacggtcacgcagcagggcaacacgcgcgacatgatc
ttcgacgcgcccttcctcatcgagtacttcagccgcttcatgacgctctcgccgggcgac
ctgatcctcacgggcacgcccgacggcgtggtcgactgcaagccgggcgacgtcgtcgtc
accgagatcgagcgcatcggcgcgctcatgaacaccatcgagacaatccaaggaaaaaca
tga
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