Variovorax sp. PMC12: C4F17_17730
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Entry
C4F17_17730 CDS
T05380
Name
(GenBank) ammonia channel protein
KO
K03320
ammonium transporter, Amt family
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_17730
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_17730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ammonium_transp
DUF6264
Motif
Other DBs
NCBI-ProteinID:
AVQ82650
LinkDB
All DBs
Position
1:complement(3831594..3833030)
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AA seq
478 aa
AA seq
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MKKLLVSLALGLSVLAAGTSGFAQTPAAPAAEAPAATAPAAAAPAAAAPADAAAAPAAAA
PAAAPAAAPAPKIDSGDTAWMLTSTLLVILMTIPGLALFYGGLGRSKNMLSVLMQVFVIF
SLISILWAVYGYSLAFSGDGNFFGGFDKIFMKGITQETFGALTTIPEYVFVAFQGTFAAI
TVALIVGAFAERAKFSAVLLFSVLWFTFSYVPIAHIVWGGGLLGKDGALDFAGGTVVHIN
AGVAGLVGAYMVGKRVGYGKEAFTPHSLTLTMVGASLLWVGWFGFNAGSAGAANALAGLA
FINTVLATAAAALSWILGESLHKGKASMLGAASGAVAGLVAVTPAAGFVGPMGSIVLGLL
AGLVCLWGVGGLKRMLGADDAFDVFGVHGVGGILGAILTGVFAAKGLGGTGGATPDTFSM
GAQVWIQIKSVALTVVWSGVVAFIAYKIADLTLGLRVSEEEEREGLDISSHGETAYNR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgcttgtctctcttgcgctcggcttgagcgtgcttgccgccggtacttcc
ggcttcgcacagaccccggcagcgcctgctgccgaggcaccggccgcaacggctcccgca
gcggcagcgcccgccgcggcggctccggccgatgcagccgcggcacccgccgcagcggcg
cccgcggccgcacccgccgctgccccggctccgaagatcgactccggcgacaccgcctgg
atgctgacttcgaccctcctcgtgatcctgatgaccatccccggcctcgcgctgttctac
ggcggcctgggccgttcgaagaacatgctgtcggtgctgatgcaggtcttcgtgatcttc
tcgctcatcagcatcctgtgggccgtctacggctacagcctggccttctcgggtgacggc
aacttcttcggaggattcgacaagatcttcatgaagggcatcacgcaggaaaccttcggt
gcgctgaccaccattcccgaatacgtgttcgtcgccttccagggcacgttcgcggccatc
accgtggcgctgatcgtcggcgccttcgcggagcgcgccaagttctcggccgtgctgctg
ttctcggtgctgtggttcaccttcagctacgtgccgatcgcccacatcgtgtggggcggc
ggcctgctgggcaaggacggcgcgctggacttcgccggcggcaccgtggtgcacatcaac
gccggtgtggccggtctcgtgggtgcctacatggtcggcaagcgcgtcggctacggcaag
gaagcgttcacgcctcactcgctcacgctcaccatggtcggcgcttcgctgctgtgggtc
ggctggttcggcttcaacgccggctcggctggtgccgccaacgccctggccggcctggcc
ttcatcaacacggtgctcgccaccgctgccgccgcgctgtcgtggatcctgggcgagagc
ctgcacaagggcaaggcctcgatgctgggtgcagcatccggtgccgtcgccggcctcgtg
gccgtcacgcccgccgccggtttcgtcggcccgatgggttcgatcgtgctgggcctgctg
gccggcctggtctgcctgtggggtgtcggcggcctgaagcgcatgctgggtgcggacgac
gcgttcgacgtgttcggcgtgcacggcgtgggcggtatcctgggtgccatcctgaccggc
gtgttcgcggccaagggcctcggcggcaccggcggcgcgacgcccgacaccttctcgatg
ggcgcgcaagtctggatccagatcaagagcgtggcgctcacggtcgtgtggtccggcgtg
gtggccttcatcgcctacaagatcgccgacctgaccctcggcctgcgtgtgtcggaagaa
gaagagcgcgaaggcctcgacatttcttcccacggcgaaaccgcatacaacaggtaa
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