Variovorax sp. PMC12: C4F17_17785
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Entry
C4F17_17785 CDS
T05380
Symbol
tagH
Name
(GenBank) type VI secretion system-associated FHA domain protein TagH
KO
K07169
FHA domain-containing protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
C4F17_17785 (tagH)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_FHA_C
FHA
Yop-YscD_cpl
DUF5315
Motif
Other DBs
NCBI-ProteinID:
AVQ82661
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All DBs
Position
1:3846649..3848559
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AA seq
636 aa
AA seq
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MRWTVIEHAGKPVASGPSALLAAPGGTIGRSPDNHLVLPDEQRQISRLQATVRFDEDGSA
VLRNMSAVLPISVNGQTLVHEQEARVADGDRVAIGSYVLEAASAQRAAPAVVAAPPPPPP
SPPPSLPPPASMPAPQPFAPAPASSAPIDALLPASSGSDVFSDLFGEGALPIGETQPTVA
MPPPMPMPRAPVPPPPSPAVQVHVPVPPPPPMPAQVPPKSAAPASSQIPSAEDWDAILAN
APRRIDTTPAPMPDPMAHEPFELPSQARRNPIDPLAEMNPQATQDMSDIALRRGVDPLSF
FAADDSAHSPLSDPRPTALTQHDAGLPGDVHPALDLLQNNKPAVPGYSHSNHAREVTAQF
RPPLPVAPAPVPAPPPAPAPAPAVAVETIEQAPPPPPPPPPPPPPPPAPPPVVAAPATPP
PQPQPPAPTAPTADSSSEALFKAFLEGAGVPEIAGQQPLDIEAMQRLGRIMRAFTDGTIE
LLSSRAMLKREVRAEITMIVDEENNPFKILPNGRAVLMQMFGARMPGFLPPEAAVHDALG
DLQSHQLGMVAGMRAALLTLLQRFDPAALSRDTPHDGGIGEKLLPGGREARLWRQLQALH
AETTSAVEDDFQAVFGRAFQQAYDKEMERLKEARRG
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggacggtgatcgaacatgccggcaagccggtggcctcgggcccctcggcgctg
ctggccgcacccggaggaacgatcgggcgcagccccgacaaccacctcgtgctgcccgac
gagcagcgacagatctctcgcctgcaagccacggtgcgcttcgacgaagacggctcggcg
gtgcttcgcaacatgagcgcggtgctgcccatcagcgtcaacgggcaaacactggtgcac
gagcaggaggcccgcgtggccgacggcgaccgcgtggcgatcggcagctacgtcctggag
gccgcgagcgcgcagcgcgcagcgccggccgtggtggctgcgccgccgccgccgccgcca
tcgccaccgccctctctccctcctcctgcttcgatgccggcgccacagccgttcgcgccg
gcgccggcttcgtccgcgcccatcgacgccttgctgccggcttcttcaggctccgacgtg
ttctccgacctgttcggcgaaggcgccctgcccatcggcgaaacgcagcccaccgtggca
atgccgccgcccatgccgatgccgcgcgcgccggtgccaccgcctccctcgcctgccgtt
caggtgcatgtgccggtaccgcccccgccacccatgcccgcgcaggtaccgccgaagtcg
gcagccccggcctcgtcgcagattccttccgccgaagactgggacgccatcctcgcgaac
gcgccgcgccgcatcgacaccacgcccgcgcccatgcccgacccgatggcgcacgagccc
ttcgagctgccgtcgcaggcgcgccgcaaccccatcgacccgctcgcggaaatgaacccg
caggcgacccaggacatgtccgacatcgcgctcaggcgcggggtcgacccgctctctttc
ttcgcggccgacgacagcgcgcattcgccgctgtccgacccgcgcccgaccgcgctgacg
caacacgacgccgggctgcccggcgacgtgcaccccgcgctcgacctgctgcagaacaac
aagccggccgtgccggggtacagccattcgaaccatgcgcgagaggtgacggcgcagttc
cgtccgccgttgccggtggcgcccgcgcccgtgcctgcaccccctcccgcgcctgcgccg
gcacctgccgtcgccgtggagacgatcgagcaggcacctcctcctccaccgcctcctcca
ccgcctcctccaccgcctcccgcgccaccgccagtggtcgccgcaccggccacgccacca
ccgcagccgcaaccccctgcacccactgcacccactgccgactcttcgtccgaagccctc
ttcaaggctttcctcgaaggcgcgggcgtgcccgagatcgccggccagcagccgctcgac
atcgaggccatgcagcgcctgggccgcatcatgcgggccttcaccgacggcaccatcgag
ctgctgtcatcgcgcgccatgctcaagcgcgaggtccgcgccgagatcacgatgatcgtg
gacgaggagaacaacccgttcaagatcctgcccaacggccgcgcggtgctgatgcagatg
ttcggcgcgcgcatgcccggcttcctgccgcccgaggccgccgtgcacgacgcgctcggc
gacctgcagtcgcaccagctcggcatggtcgccggcatgcgtgccgcgctgctcacgctg
ctgcagcgcttcgatcccgcggcgctcagccgcgacacgccgcacgacggcggcatcggc
gagaagttgctgcccggtggccgcgaggcgcgcctgtggcgccagctgcaggcgctgcat
gccgagaccacgtcggccgtggaggacgatttccaggccgtgttcggccgcgccttccag
caggcctacgacaaggagatggaacggctgaaggaggcgcgccgtggttga
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