Variovorax sp. PMC12: C4F17_18145
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Entry
C4F17_18145 CDS
T05380
Name
(GenBank) LysR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AVQ82726
UniProt:
A0A2P1VC23
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Position
1:3933487..3934467
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AA seq
326 aa
AA seq
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MDVNFRTLDLNLLRVFDEVMAERNLTRAARNLSITQPAVSNALRRLRDVLGDELVRRSGA
GVEPTPRALALWPTVRDALRQLQHTLAPGEFDAATADTTFLLAMADATAAELIPGLVQIA
EKEAPAISLRVLPLTTRDPRRMLELEEVDMAVGYFPAVIASLAARGQSGVGVAFETQRLY
LGQYVCVMRRGHPLADAPLTLDDYCAARHLLVSFSGRPYGFIDQTLGAMGRERRIVVTVN
QFFTAGRVVANSDLLTVLPRHFVTVTGIDDQLVLRDLPFDQPPVHVDAIWHRRAQHGHSH
EWLRTALLRSAAAAFAGSVLGQRVPD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaactttcgcacgctcgacctcaacctgcttcgcgtcttcgacgaggtgatg
gcagagcgcaacctcacgcgcgctgcccgcaatctgtcgatcacgcagcctgcggtgagc
aacgcgttgcggcgcctgcgcgatgtactgggggatgaactggtgcgccgctccggcgcc
ggcgtagagcccacgccacgggccctggctctctggccgacggtgcgcgacgcgcttcgc
cagcttcagcacacgctggcgcccggcgaattcgatgccgccacggccgacacaaccttc
ctgctggccatggccgacgcaaccgcggccgagctcatcccgggcctcgtgcagatcgcc
gagaaagaagcgcccgccatctcgctgcgcgtgctgccgctgaccacgcgcgacccgcgc
cgcatgctcgagctcgaagaagtcgacatggccgtcggctactttccggccgtgatcgcc
agcctcgcggcgcgtggccaatcaggcgtcggggttgcgttcgagacccagcggctctac
ctgggccaatatgtatgcgtgatgcgccggggccatccgctggcggatgcgcccctaacg
ctcgacgactactgcgcggcgcggcaccttctggtgagtttttctgggcggccttacggc
ttcatcgaccagacgctgggcgccatggggcgcgagcggcgcatcgtggtgacggtgaac
cagttcttcaccgcaggccgtgtggtggccaattcagacttgctgaccgtgctgccgcgt
cacttcgtgacagtcaccggcatcgacgaccaactggtactgcgcgacctgcccttcgac
cagccgccggtgcacgtggatgccatctggcaccggcgcgcccagcacgggcattcgcac
gagtggctgcgcacggcgctgttgcgctcggcagcagcggctttcgccggatcggtcctc
gggcagagggtgcccgactga
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