Variovorax sp. PMC12: C4F17_18175
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Entry
C4F17_18175 CDS
T05380
Name
(GenBank) glutamine synthetase
KO
K01915
glutamine synthetase [EC:
6.3.1.2
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00220
Arginine biosynthesis
vam00250
Alanine, aspartate and glutamate metabolism
vam00630
Glyoxylate and dicarboxylate metabolism
vam00910
Nitrogen metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01230
Biosynthesis of amino acids
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C4F17_18175
09102 Energy metabolism
00910 Nitrogen metabolism
C4F17_18175
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C4F17_18175
00220 Arginine biosynthesis
C4F17_18175
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_18175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_18175
Enzymes [BR:
vam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.2 glutamine synthetase
C4F17_18175
Exosome [BR:
vam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C4F17_18175
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Gln-synt_C
Gln-synt_N_2
Gln-synt_N
Motif
Other DBs
NCBI-ProteinID:
AVQ82731
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Position
1:3940262..3941716
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AA seq
484 aa
AA seq
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MSSISSNKFVDRFGLWSDDQHAQARELVRRIDSGEVDLVRFAWPDQHGILRGKTLVASEA
RSALWEGVNLTSTLLAKDTSHKTVFPVFTQGGGFAIEGLQGGADFTIVADPATFKVLPWS
PRTGWVMCDAYMADGKPCPFATRQILQRAVRQLDELGLDFIAGLEVEFHVFRLDDARMGL
ADSGQPGEPPRVSLLSHGHQYLTELRYDRVDTLMELLRSQLLALGLPLRSLEIEFGPSQF
ELTFGPTAGVMPADTMVLLRSAIKQICQRNGLHATFMCRPKIPNVMSSGWHLHQSLRRKS
DGVNAFMPETEGQTLSEIGMHYLGGLKAHACGAAALASPTINGYRRYRPFSLAPDRAIWA
RDNRGAMLRVLGGMGQSASRIENRVGEPTANPYLYLASQLFSGLDGIRHKTDPGPSADAP
YETPAEQLPRSLGDALACLRRDEMLNAQMGKTFVDYLCHIKEAEIARFNLEVSEWEHREY
FDMF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatcagcagcaacaaattcgtcgaccgcttcggtctctggtccgacgaccag
catgcgcaggccagggaactggtgcgccgcatcgacagcggcgaggtcgatctcgtgcgc
ttcgcctggcccgaccagcacggcatcctgcgcggcaagacgctggtcgccagcgaggcg
cgctccgccctctgggaaggcgtgaacctcacctccaccctgctggccaaggacacctcg
cacaagaccgtgttcccggtgttcacacagggcggcggcttcgccatcgagggcctgcag
ggcggcgccgacttcaccatcgtggccgaccccgccaccttcaaggtgctgccgtggtcg
ccgcgcaccggctgggtgatgtgcgacgcctacatggccgacggcaagccctgccccttc
gccacgcggcagatcctgcagcgcgcggtgcgccagctcgacgagctggggctggacttc
atcgccggcctggaagtggagttccacgtcttcaggctcgacgacgcgcgcatgggcctg
gccgactcgggccagcccggcgaaccgccgcgcgtgtcgctgctgtcgcacggccaccag
tacctgaccgagctgcgctacgaccgcgtcgacacgctgatggagctgctgcgctcgcaa
ctgctggcgctcggcctgccgctgcgctcgctggaaatcgagttcggcccgagccagttc
gagctgactttcggccccaccgccggcgtgatgcccgccgacaccatggtgctgctgcgc
agcgccatcaagcagatctgccagcgcaacggcctgcacgccaccttcatgtgtcgcccg
aagatcccgaacgtgatgtccagcggctggcacctgcaccagtcgctgcgccgcaagagc
gacggcgtgaatgccttcatgcccgagaccgagggccagacgctcagcgagatcggcatg
cactacctcggcggcctcaaggcgcacgcctgcggcgcggccgcgctcgcgagccccacc
atcaacggctaccggcgctaccgccccttctcgctagcgcccgaccgcgcgatctgggca
agagacaaccgcggcgcgatgctgcgcgtgctcggcggcatggggcagagcgcctcgcgc
atcgagaaccgcgtgggcgagccgacggccaatccgtacctgtacctcgcgtcgcagctc
ttctcgggactggacggcatccgccacaagaccgaccccgggccctcggccgatgcgccg
tacgaaaccccggcggagcagctgccgcgctcgctcggcgacgccctcgcctgcctgcgc
cgcgacgagatgctcaacgcgcagatgggcaagaccttcgtcgactacctctgccacatc
aaggaagcggaaatcgcccgcttcaacctcgaagtctcggagtgggaacaccgcgagtac
ttcgacatgttctga
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