Variovorax sp. PMC12: C4F17_18195
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Entry
C4F17_18195 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_18195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_18195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_18195
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_18195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AVQ82735
LinkDB
All DBs
Position
1:3944268..3945230
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AA seq
320 aa
AA seq
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MKALTVSPAQLRAAEAVFWIALASSFFLLPDKLTLMSQIMIFGLFAVSLDMALGYAGILT
VGHAAFFGAGAYAAGLLAKYGWSEPFTGLAFALVVSGLLGYALSYLVVRGADLTRLMITI
GVCVLLFEVANRLSGITGGTDGLQGVVIAPVLGMFDFDLYGKTAFCYAFGVVFAMFLLVR
LVLRSPFGLALRGIHDSRKRMLAIGSPVEARLRMAYAFSAAVAGVAGALLAQTTQFVGIE
SIGFNRSAEVLIILVLGGTGRLYGGMIGAIVYMLVHDWFADMNPQYWMFWLGIFLIAAVM
LGRGGIMGALSRFVRTGKAR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccctgaccgtctctcccgcgcagttgcgcgccgcggaagccgtcttctggatc
gcgctcgcgtcgagcttcttcctgctgcccgacaagctcacgctgatgagccagatcatg
atcttcggcctgttcgcggtgtcgctcgacatggcgctgggctacgcgggcatcctcacc
gtcggccatgccgcgttcttcggcgctggcgcctacgcggccgggctgctcgccaagtac
ggctggagcgagcccttcaccggcctcgcgttcgcactggtcgtcagcggcctgctgggc
tatgcactgagctacttggtggtgcgcggcgccgacctcacgcggctgatgatcaccatc
ggcgtgtgcgtgctgctgttcgaggtggccaaccggctctcgggcatcaccggcggcacc
gacgggctgcagggcgtggtcatcgcgccggtgctcggcatgttcgacttcgacctctac
ggcaagaccgccttctgctacgccttcggcgtggtgttcgcgatgttcctgctggtgcgg
ctggtgctgcgctcgcctttcgggctggcgctgcgcggcatccacgacagccgcaagcgc
atgctggccatcggctcgccggtggaagcgcgtctgcgcatggcctacgccttctcggcc
gcggtggccggcgtggcgggcgcgctgctggcgcagaccacgcagttcgtcggcatcgag
tcgatcggcttcaaccgctcggccgaggtgctcatcatcctggtgctgggcggcaccggc
cggctgtacggcggcatgatcggcgccatcgtctacatgctggtgcacgactggttcgcg
gacatgaatccgcagtactggatgttctggctcggcatcttcctgatcgcggcggtcatg
ctggggcgcggcggcatcatgggcgcgctgtcgcgcttcgtccgcacggggaaggcgcga
tga
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