Variovorax sp. PMC12: C4F17_18370
Help
Entry
C4F17_18370 CDS
T05380
Name
(GenBank) catechol 1,2-dioxygenase
KO
K03381
catechol 1,2-dioxygenase [EC:
1.13.11.1
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00361
Chlorocyclohexane and chlorobenzene degradation
vam00362
Benzoate degradation
vam00364
Fluorobenzoate degradation
vam00623
Toluene degradation
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C4F17_18370
00364 Fluorobenzoate degradation
C4F17_18370
00361 Chlorocyclohexane and chlorobenzene degradation
C4F17_18370
00623 Toluene degradation
C4F17_18370
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.1 catechol 1,2-dioxygenase
C4F17_18370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dioxygenase_C
Dioxygenase_N
CarboxypepD_reg
DUF4198
TAL_effector
Big_1
DUF6795
ToxB_N
SdrD_B
DUF7382
GSPE_N1E
SpaA
Motif
Other DBs
NCBI-ProteinID:
AVQ82767
LinkDB
All DBs
Position
1:3979565..3980431
Genome browser
AA seq
288 aa
AA seq
DB search
MNIATSPDSVLGHVLDAMKHTPDPRLRTVMEAVTRHLHALVQEVKLTEDEFEQALEFIVA
IGHATGETKNEVVLAADILGVSTVVALQNNQDPHGESPAALLGPFWRANAPACAPGDNIA
RSGTPGTPLEVTGTVRDQEGRPVAGATVDVWQASPVGLYENQDPSQEDMNLRGRFTTDAE
GRFHFRSVRPAGYPVPTDGPCGVLLRAQQRHPNRPAHLHFMVSKPGHKVLITQVFADDDE
NLESDPTFGVTRRLIGRFALAPDGKSASMHHDFELEPGEMKFPRPPIP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgccacctcccccgactcggtgctgggccatgtgctcgacgccatgaagcac
acgcccgacccgcggctgcgcacagtgatggaggctgtcacgcgccacctgcacgcgctg
gtgcaggaagtgaaactgacggaagacgagttcgagcaggcgctcgaattcatcgtcgcc
atcggccatgccacgggcgagaccaagaacgaagtggtgctggcggcggacatcctgggt
gtgtcgaccgtggtcgcgctgcagaacaaccaggacccgcacggcgaatcgcccgccgcg
ctgctcgggccgttctggcgggcgaatgcaccggcctgcgcgccgggcgacaacatcgcg
cgctcgggcacgcccggcacgccgctcgaagtgacgggcacggtgcgcgaccaagagggc
cggccggtggccggcgccacggtcgacgtgtggcaggcctcgcccgtcggcctctatgaa
aaccaggacccgtcgcaggaggacatgaacctgcgcggccgcttcaccaccgacgccgaa
ggacgcttccatttccgcagcgtgcgaccggccggctacccggtgccgaccgacgggccc
tgcggcgtgctgctgcgcgcgcagcagcgccaccccaaccggcccgcgcacctgcacttc
atggtgagcaagcccggccacaaggtgctgatcacgcaggtgttcgcagacgacgacgag
aacctggaaagcgacccgaccttcggcgtgacgcgcaggctgatcgggcgcttcgcgctg
gcgcctgatggcaagagcgcgtcgatgcaccacgacttcgaactcgaacccggcgaaatg
aaattcccgcgccccccgattccctga
DBGET
integrated database retrieval system