Variovorax sp. PMC12: C4F17_18415
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Entry
C4F17_18415 CDS
T05380
Name
(GenBank) L-serine ammonia-lyase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00260
Glycine, serine and threonine metabolism
vam00270
Cysteine and methionine metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01200
Carbon metabolism
vam01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4F17_18415
00270 Cysteine and methionine metabolism
C4F17_18415
Enzymes [BR:
vam01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
C4F17_18415
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Motif
Pfam:
SDH_alpha
SDH_beta
Motif
Other DBs
NCBI-ProteinID:
AVQ82775
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Position
1:complement(3988016..3989398)
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AA seq
460 aa
AA seq
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MLSAFDIFKIGIGPSSSHTVGPMRAALMFARSLERQGVLAQVARLHADLFGSLGATGPGH
ATDQGVILGLFGDAPDTVRPETVQPRLEALRRTGRLDLLGRKSIAFDRVRDIAFRGEESL
PEHPNAMRFTAFSAEGAVLAEGTYFSVGGGFVVEGGQAVAETVAAASAVPHPFSTGDELM
AQCRATGLSVAALVMRNECVWRPEAEVRAGLLRIWGVMQQCVQRGFGIDNPLAAQALPGP
LRMRRRAPELNRELLAQAGAADPLAVMDWVNAFAMAVNEENAAGGRVVTAPTNGAAGVVP
AVMHYYQRFVQQAGDEGIVDFLLTAAAIGMLYKANASISGAEVGCQGEVGVACSMAAGAL
AAVLGATPAQVENAAEIGMEHNLGLTCDPVGGMVQIPCVERNAMGAVKAINAARMALRGD
GSHYVSLDAVIRTMKQTGEDMKSTYKETSLGGLAVNVVEC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgccttcgacatcttcaagatcggcatcggcccgtcgagctcccacaccgtg
gggccgatgcgcgccgcgctcatgttcgcccggtcgctcgagcggcagggcgtgctggcg
caggtggcgcggctgcatgccgacctgttcggctcgctcggtgccaccgggcccgggcac
gccaccgaccagggcgtgatcctcgggctcttcggcgacgcgcccgacaccgtgcggccc
gagaccgtgcagccccggctggaggcgctgcgccgcaccgggcggctcgacctgctcggc
cgcaaatccattgccttcgaccgcgtgcgcgacatcgcctttcgcggcgaagagtcgctg
cccgagcaccccaacgccatgcgcttcaccgcgttctcggccgaaggcgccgtgctggcc
gagggcacgtatttctcggtcggcggcggcttcgtcgtcgagggcgggcaggccgtggcc
gagacggtggccgccgcgtccgccgtgccgcatcccttttccacgggcgacgaactcatg
gcgcaatgccgcgccaccggcctgtcggtggctgcgctggtcatgcgcaacgaatgcgtc
tggcggcccgaggccgaagtgcgcgccgggctgctgcgcatctggggcgtgatgcagcag
tgcgtgcagcgcggcttcggcatcgacaacccgctggccgcgcaagcgctgcccggcccg
ctgcgcatgcgccgccgcgcgccggagctgaaccgcgaactgctggcgcaggccggcgcg
gccgatccgctcgcggtgatggattgggtcaatgccttcgcgatggcggtgaacgaggag
aacgccgccggcggccgcgtggtcaccgcgcccaccaacggcgcggcgggcgtggtgccg
gccgtcatgcactactaccagcgcttcgtgcagcaggcgggcgatgaaggcatcgtcgac
ttcctgctcaccgccgcggccatcggcatgctctacaaggccaacgcctccatctcgggc
gccgaggtcggctgccagggcgaagtgggcgtggcctgctccatggctgccggcgcgctg
gccgcggtgctcggcgccacgccggcgcaggtcgagaacgccgccgagatcggcatggaa
cacaacctgggcctgacctgcgacccggtcggcggcatggtgcagatcccctgcgtggag
cgcaatgcgatgggcgcggtgaaggccatcaacgcggcgcgcatggcgctgcgcggcgac
ggcagccactatgtgtcgctcgacgcggtgatccgcaccatgaagcagaccggcgaagac
atgaagtccacctacaaggagacttcgctgggggggcttgcggtgaacgtggtggagtgc
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