Variovorax sp. PMC12: C4F17_18605
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Entry
C4F17_18605 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_18605
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_18605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_18605
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_18605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
SYS1
Motif
Other DBs
NCBI-ProteinID:
AVQ82810
LinkDB
All DBs
Position
1:4027271..4028221
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AA seq
316 aa
AA seq
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MKRGAFLLPVACAIAIGIAGPFMGNYASDFVVKIMILSIFALSLELLVGMTGLVSLGHAA
FYGIGAYVTVLASGSEGGNFALLLPLAMGAAALYALFVGALSLRTRGVYFIMVTLAFAQM
AFFVFHDTKVGGGSDGIYMYVRPAIGALDMENRTVLFYVVLASLVFTYGLLALIRRSRFG
AALAGIRVNEQRMRAAGFSVYGYKLAAFVLAGALAGLAGFLLASRDGVVNPELMAWHNSG
EVLLMVILGGLGHLRGAVIGAIAFTLLKEIFSTHAVMGPLADHWQLTLGLTIIVFVALLP
KGLIGLVQRLSPKGAA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcggcgccttcctcctgcccgtggcctgcgcgatcgccatcggcatcgccggt
cctttcatgggtaactacgcatcggacttcgtcgtgaagatcatgatcctgtcgatcttc
gcgctcagcctggaactgctggtcggcatgaccggcctggtgagcctgggccatgcggcg
ttctacggcatcggcgcctacgtcaccgtgctggcgtcgggcagcgaaggcggcaacttc
gcgctgctgctgccgctggccatgggcgcggcggcgctgtatgcgctgttcgtcggcgcg
ctgagcctgcgcacgcgcggggtgtacttcatcatggtgacgctggccttcgcgcagatg
gccttcttcgtgttccacgacaccaaggtcggcggcggcagcgacggcatctacatgtac
gtgcggcccgccatcggcgcgctcgacatggagaaccgtaccgtgctgttctacgtggtg
ctggcgtcgctggtgttcacctacgggctgctggccctgattcgccgctcgcgcttcggt
gcggcgctggcgggcatccgcgtgaacgagcagcgcatgcgcgcggcggggttctcggtg
tacggctacaagctcgcggccttcgtgctggcgggtgcgctggccgggctcgcgggcttc
ctgctggcctcgcgcgacggcgtggtcaaccccgagctgatggcatggcacaactcgggc
gaggtgctgctgatggtgattctcggcggcctcggccatctgcgcggcgcggtgatcggc
gccatcgcgttcacgctgctcaaggaaattttctcgacgcatgccgtgatgggtccgctg
gccgaccactggcagctgacgctggggctgacgatcatcgtgttcgtagcgctgctgccc
aagggcctgatcggcctggtgcagcgcctgtcgccgaagggggccgcatga
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