Variovorax sp. PMC12: C4F17_18765
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Entry
C4F17_18765 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_18765
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_18765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_18765
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_18765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
AVQ82837
LinkDB
All DBs
Position
1:complement(4061120..4062301)
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AA seq
393 aa
AA seq
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MPLLSRHRFLRHVAVLSAALLAAPLAALAAPATGDPVWFGVSGPLTGQNAQYGAQWKAGF
DLALEHINAQGGIHGRPLAYSFEDSQSDPRQSVAIAQKLVNDKRVLIELGDFSSPASMAA
SPIYQRAGLVQLGFTNSHPDFTKGGDYIWSPSISQADAQPLLAELAVKTLGFKRIAVLYL
NTDWGRTSKDVLVKAAQERGAQVAIAEGYQPDEKDFRSTLVRVRDANPDGLVLISYYPDG
ALIAGQVRSVGLRQPIAAVGSVYSPKFIELGGAAVNGIFTNTAFYPDEPRTEVQDFVKSF
RARYGKEPDAFNAYAYDAVVYAAAALRQAGANADRKAVRDAFYKIKDVPSVIFGKASFDA
QTRRIIGVKSVNLVVKDGKWAQLDEKAALAAAR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctttcccgccaccgcttcctgcgccatgtggccgttctttccgctgccctg
ctggccgcgccgctcgccgccctggccgcgcccgccacgggcgatcccgtgtggttcggc
gtgagcggtccgctcaccgggcagaacgcgcagtacggcgcgcagtggaaggccggcttc
gaccttgcgctggagcacatcaatgcgcagggcggcatccatggacgtccgctggcctac
agcttcgaggacagccagagcgatccgcgccagtcggtggccatcgcgcagaagctggtg
aacgacaagcgcgtgctcatcgagctcggcgacttctccagcccggcctcgatggcggca
tcacccatctaccagcgcgcaggcctggtgcaactcggctttaccaactcgcaccccgac
ttcaccaagggcggcgactacatctggagtccttccatcagccaggccgatgcacagccg
ctgctggccgaactcgcggtgaagacgctgggcttcaagcgcatcgcggtgctctacctc
aacaccgactggggccgcaccagcaaggacgtgctcgtgaaggccgcccaggagcgcggc
gcgcaggtcgccatcgccgagggctaccagcccgacgagaaggacttccgctcgacgctg
gtgcgcgtgcgcgacgccaaccccgacgggctggtgctcatctcctactaccccgacggc
gcgctcatcgcgggccaggtacgcagcgtggggctcaggcagcccatcgccgcggtgggc
tcggtgtattcgccgaagttcatcgagctgggcggcgcggcggtgaacggcatcttcacc
aacactgcgttctatccggacgagccgcgcaccgaggtgcaggacttcgtgaagagcttc
cgcgccaggtacggcaaggagcccgacgcgttcaatgcctacgcctacgacgccgtggtg
tacgccgccgccgcgctgcgccaggccggcgcgaatgccgatcgcaaggccgtgcgcgac
gcgttctacaagatcaaggacgtgccgagcgtgatcttcggcaaggccagcttcgatgcg
cagacgcggcggatcatcggcgtgaagagcgtgaatctagtcgtgaaggacggcaagtgg
gcgcagctggacgagaaggcagcgcttgccgcggccaggtag
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