Variovorax sp. PMC12: C4F17_18945
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Entry
C4F17_18945 CDS
T05380
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00550
Peptidoglycan biosynthesis
vam01100
Metabolic pathways
vam01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4F17_18945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4F17_18945
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vam01003
]
C4F17_18945
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
C4F17_18945
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
C4F17_18945
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C4F17_18945
Glycosyltransferases [BR:
vam01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C4F17_18945
Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
C4F17_18945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AVQ82872
LinkDB
All DBs
Position
1:complement(4095538..4097937)
Genome browser
AA seq
799 aa
AA seq
DB search
MSKRSSSTPPDDGSAPADPNRRWKRIAKWGAVVVGSGALVVLVAAIVAVVAIYPKLPDVS
ELSDYRPKLPLRVYSTEGQLIGEFGEERRNLTPFADIPKVMKDAVLAVEDARFYDHGGVD
YKGFVRAAVASLKGGRKQGASTITMQVARNVYLSSERTMSRKTYEILLALRLEQQLTKDQ
ILEIYLNQIYLGNRAYGFAAAAETYFGKPLQDVTIAEAAMLAGLPKAPGANNPVANPRRA
RARQLYVIDRMQETGFITAEQAAAAKKEELHLRDAADPNRLHAEYVAETVRQMMYAQYGD
SIYTSGLKVYTSLVAADQAAAYKSLRKGVMDYERRQAYRGPEKFVDLPTDQKEIDEAVDD
ALAEHPDNGDVIAAVVLDASPKEISAVRANGETIQITGEGLKPAQSGLAAKAPPNIKIRR
GAVIRVAKTPKNTWEITQLPEVEAAFIGMDPRSGAIKALVGGFDFGKNKFNHVTQAWRQP
GSSFKPFIYSAALEKGFTPATVVNDAPLYFDASANGGQPWEPKNFEGTYDGPMPLRTALM
KSKNLVTLRVLQSIGAPYAQDWVTKFGFDKDKQPANLPMGLGAGSVTPMQMAVGYSVFAN
GGYRVNPYLVTKVTDMKGKVLMETEPPVLDESRRAIPQRNAFIMSSLLQSVVRNGTGFKA
YQTLKRDDLYGKTGTTNDSFDTWFAGFQPTMVGVAWVGYDTPRQLGVRGETGGSLSLPIW
TGYMQTALQGVPVTQPAEPPGVVRIDGELYFDDFTPGHNVASLGLDSTEAPPPVEELTSA
PIGAPPPPEERNKILDFFR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgctcaagctccacccctcccgacgacggttccgcgccggccgatccgaac
cgccgctggaaacgcatcgccaagtggggcgcggtggtggtgggttccggcgcgctggtg
gtgctggtcgccgccatcgtggccgtggtggccatctatccgaagctgccagatgtctcc
gaactgtccgactaccgccccaagctgccgctgcgcgtgtactcgaccgaaggccagctg
atcggcgagttcggtgaagagcgccgcaacctcacgccgttcgccgacattcccaaggtc
atgaaagacgcggtgctcgccgtggaagacgcgcgcttctacgaccacggcggcgtcgac
tacaagggcttcgtgcgcgcggcggtcgccagcctgaagggcgggcgcaagcagggcgcc
tccaccatcacgatgcaggtcgcgcgcaacgtgtacctgagctccgagcggaccatgagc
cgcaagacctacgagatattgctggcgctgcggctcgagcagcagctcaccaaggaccag
atcctcgagatctacctgaaccagatttacctgggcaaccgcgcctacggtttcgccgcc
gccgccgagacctacttcggcaagccgctgcaggacgtgaccatcgccgaggccgccatg
ctggccggcctgccgaaggcgcccggcgccaacaaccccgtggccaacccgcgccgcgcg
cgggcgcgccagctgtatgtgatcgaccgcatgcaggaaaccggcttcatcaccgccgag
caggcggccgccgcgaagaaggaagaactgcacctgcgcgatgccgccgacccgaaccgg
ctgcatgcggagtacgtggccgagaccgtgcggcagatgatgtacgcgcagtacggcgac
agcatctacaccagcggcctgaaggtctacacctcgctggtcgcggccgaccaggccgca
gcctacaagtcgctgcgcaagggcgtcatggactacgagcgccgccaggcctatcgcggt
cccgagaagttcgtcgatctgccaaccgatcagaaggaaatcgacgaggccgtggacgac
gcgctggccgaacaccccgacaacggcgacgtgatcgcggccgtggtgctcgatgccagt
ccgaaggaaatcagcgccgtgcgcgccaacggcgaaaccatccagatcaccggtgagggc
ctgaagcccgcgcagtcgggcctcgcggccaaggcgccgccgaacatcaagatccgccgc
ggcgcggtgatccgcgtcgcgaagacgccgaagaacacctgggagatcacgcagctgccc
gaggtcgaggcggccttcatcggcatggacccgcgctcgggcgccatcaaggcactggtc
ggcggcttcgatttcggcaagaacaagttcaaccacgtgacccaggcctggcgccagccg
ggctcgagcttcaagcccttcatctattcggccgcgctcgagaaaggcttcacgcccgcc
accgtggtgaacgacgcgccgctgtacttcgacgccagcgccaacggcggccagccgtgg
gagccgaagaacttcgaaggcacctacgacggcccgatgccgctgcgcaccgcgctcatg
aagtcgaagaacctggtgacgctgcgcgtgctgcagtccatcggcgcaccctacgcgcaa
gactgggtcaccaagttcggcttcgacaaggacaagcagcccgccaacctgcccatgggc
ctgggcgcaggctcggtcacgccgatgcagatggcggtgggctactcggtgttcgccaac
ggcggctaccgcgtcaacccgtacctcgtgaccaaggtgaccgacatgaagggcaaggtc
ctgatggagaccgagccgccggtgctcgacgaatcgcgccgtgccattccgcagcgcaac
gccttcatcatgagttcgctgctgcagagcgtggtgcgcaacggcaccggcttcaaggcc
taccagacgctcaagcgcgacgacctctacggcaagaccggcaccaccaacgactccttc
gacacctggttcgcgggcttccagccgaccatggtcggcgtggcctgggtcggctacgac
acgccgcggcagctcggcgtgcgcggcgaaaccggcggcagcctgagcctgccgatctgg
accggctacatgcagacggcgctgcagggcgtgccagtgacgcagccggccgaaccgccg
ggcgtggtgcgcatcgacggcgagctgtatttcgacgacttcacgccgggccacaacgtc
gccagcctgggcctggacagcaccgaggcgccgccgccggtggaggaactcacgagcgcg
cccatcggcgcaccgccgccgccagaagaacgcaacaagatcctcgatttcttccgctag
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