Variovorax sp. PMC12: C4F17_18975
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Entry
C4F17_18975 CDS
T05380
Name
(GenBank) glycosyl transferase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00550
Peptidoglycan biosynthesis
vam01100
Metabolic pathways
vam01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4F17_18975
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4F17_18975
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vam01003
]
C4F17_18975
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
C4F17_18975
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
C4F17_18975
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C4F17_18975
Glycosyltransferases [BR:
vam01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C4F17_18975
Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
C4F17_18975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
DUF748
T4SS_CagC
Motif
Other DBs
NCBI-ProteinID:
AVQ82877
LinkDB
All DBs
Position
1:4104520..4105788
Genome browser
AA seq
422 aa
AA seq
DB search
MKKTLRIVLFSLMALVITACVAIFLIVKLALAPAAGEWSTTVKAGPLNFEIGVPTALRVA
TSPWFAPYLDGRSFDTRAGAVRFAWKPAGELLEMQCTPCSAEVPALGTQPIRVERLVATV
KRDGNTLSGTFEATPESTDTTRLHGRWEGKLSPRNLQLSAKVEDAPIARWYAVLVPTLPE
LRSARIGGTLALHGQLQLPEATFAVQPTISQFTVEGLGTEAMLNARTSCGPSARLTNDSW
LARAVVAAEDQRFFTHAGYDLTEILASIDNNQKPGQTKRGGSTLTQQLAKLLVTGSDRTA
ERKLREMLYAVEMEQTLGKARILQLYLDNAPWGGSICGAEAAARRYFKRSARTLEPAQAV
WLAAMLHKPQAVLEQWRRDGHIDADRTKWVAESIRGISRNQREALLKSVAAAKFTAPEAV
TQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagaccctgcgaattgtgcttttcagcctgatggcccttgtcatcacggcgtgt
gttgctatctttttgatagtcaagctggcgcttgcgccggctgccggcgaatggagcacc
acggtgaaggccggtccgctgaatttcgagatcggcgtgcccaccgcattgcgcgtggcc
acctcgccgtggtttgcgccctacctggacgggcgttcgttcgacacccgcgccggcgcc
gtgcgctttgcctggaagccggccggggaactgctcgagatgcaatgcacgccctgcagc
gccgaggtgccggcgctcggcacccagccgatcagggtcgagcggctggtggccaccgtc
aagcgcgacggcaacaccctcagcggcaccttcgaagccacgcccgagagcaccgacacg
acccggttgcacggccgctgggaaggcaagctctcgccaaggaatctgcagctcagcgcc
aaagtcgaagacgcgcccatcgcccgctggtatgcggtgctggtgcccacgctgcccgaa
ttgcgcagcgcgcgcatcggcggcacgctggcgctgcacgggcaactgcagctgcccgag
gccacgttcgcggtgcagccgaccatcagccagttcaccgtcgagggactcggcaccgag
gccatgctcaatgcgcgcaccagctgcggcccgtcggccaggctgaccaacgacagctgg
ctggcgcgcgcggtggtagccgccgaagaccagcgcttcttcacccatgccggctacgac
ctgaccgagatcctcgcgtcgatcgacaacaaccagaagccgggccagaccaagcgcggc
ggcagcaccctcacgcagcagctggccaagctgctggtgacgggcagcgaccgcaccgcc
gaacgcaagctgcgcgagatgctctacgcggtcgagatggagcagacgctgggcaaggcc
cgcatcctgcagctctacctcgacaacgcgccctggggcggcagcatctgcggcgccgaa
gccgcggcgcggcgctacttcaagcgcagcgcgcgcacgctggagccggcgcaggccgtg
tggctcgcggccatgctgcacaagccgcaggccgtgctcgagcagtggcggcgcgacggc
cacatcgacgccgaccgcaccaagtgggttgccgaaagcatccgcggcatcagccggaac
cagcgcgaggcactgctcaagagcgtggccgcggcgaagttcacggcgcccgaggccgtc
acgcaatga
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