Variovorax sp. PMC12: C4F17_19115
Help
Entry
C4F17_19115 CDS
T05380
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00541
Biosynthesis of various nucleotide sugars
vam01100
Metabolic pathways
vam01250
Biosynthesis of nucleotide sugars
Module
vam_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C4F17_19115
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
C4F17_19115
Enzymes [BR:
vam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
C4F17_19115
Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
Lipid A
C4F17_19115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hydrolase
Hydrolase_3
Ribosomal_L25p
Hydrolase_6
HAD_SAK_2
Motif
Other DBs
NCBI-ProteinID:
AVQ82903
LinkDB
All DBs
Position
1:4133251..4133799
Genome browser
AA seq
182 aa
AA seq
DB search
MALEFQAETLLAAQDVRIVFFDIDGVLTDGGVYFTEHGETLKRFSILDGYGLKLLRKAGI
VPAVITGRDSKPLRVRLEALGIEHVRYGTEDKLPAAQAMLGQLGFTWAQAAAIGDDWPDL
PVLTRVGFAAAPANAHAEVRGVARYVTKARGGEGAAREFCDLLLTACGQYRAMLDAARGP
NT
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgagttccaggccgagaccctgctcgccgcgcaggacgtgcgcatcgttttc
ttcgacatcgacggcgtcctgaccgacggcggcgtgtacttcaccgagcacggcgaaacg
ctcaagcgcttcagcatcctcgacggctacggcctcaagctgctgcgcaaggcgggcatc
gtgcccgcggtgatcaccgggcgcgattccaagccgctgcgcgtgcggctcgaggcgctg
ggcatcgagcatgtgcgctacggcaccgaagacaagctgcccgccgcgcaagccatgctc
ggccagctgggcttcacgtgggcacaggccgcggccatcggcgacgactggcccgacctg
ccggtgctcacgcgcgtgggtttcgcggcggcgccggccaatgcgcatgccgaggtgcgc
ggcgttgcccgctacgtcaccaaggcgcgcggcggcgaaggcgcggcgcgcgagttctgc
gacctgcttctcacggcctgcggccagtaccgcgccatgctcgacgctgcccggggcccg
aacacatga
DBGET
integrated database retrieval system
