Variovorax sp. PMC12: C4F17_19325
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Entry
C4F17_19325 CDS
T05380
Symbol
gap
Name
(GenBank) type I glyceraldehyde-3-phosphate dehydrogenase
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00010
Glycolysis / Gluconeogenesis
vam00710
Carbon fixation by Calvin cycle
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
vam_M00002
Glycolysis, core module involving three-carbon compounds
vam_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C4F17_19325 (gap)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
C4F17_19325 (gap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vam04131
]
C4F17_19325 (gap)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_19325 (gap)
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
C4F17_19325 (gap)
Membrane trafficking [BR:
vam04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
C4F17_19325 (gap)
Exosome [BR:
vam04147
]
Exosomal proteins
Proteins found in most exosomes
C4F17_19325 (gap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gp_dh_C
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
AVQ82937
LinkDB
All DBs
Position
1:4185999..4187000
Genome browser
AA seq
333 aa
AA seq
DB search
MAIKLGINGFGRIGRNVLRAAVQNFKNDIEIVAINDLLEPDYLAYMLQYDSVHGRFKGEV
TVDGNTLIVNGKRIRLTQERDPAQLKWNEVGADVVLESTGLFLTKETAQKHIDAGAKKVI
LSAPSKDDTPMFVYGVNDKKYAGEAIVSNASCTTNCLAPLAKVLNDKWGIKRGLMTTVHA
ATATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKAVGVVIPELNKKLTGMSFRVPTSDV
SVVDLTVELVKEATYKEICAEMKAQSEGALKGVLGYTEDKVVATDFRGDPRTSIFDAEAG
IALDGTFVKLVSWYDNEWGYSNKCLEMVKVVSK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaactcggtatcaacggcttcggccgcatcggtcgcaacgtgctgcgcgca
gcagtgcagaacttcaagaacgacatcgaaatcgttgccatcaacgacttgctcgagccc
gactacctcgcctacatgctccagtacgactcggtgcatggccgcttcaagggtgaggtc
acggttgacggcaatacgctgatcgtgaacggcaagaggatccgcctgacccaggagcgc
gaccccgcgcaactgaagtggaacgaagtcggcgccgacgtcgtgctcgaatcgaccggc
ctgttcctcaccaaggaaaccgcgcagaagcacatcgacgcgggcgccaagaaggtcatc
ctgtcggcaccgtcgaaggacgacacccccatgttcgtctacggcgtgaacgacaagaag
tacgccggcgaagccatcgtcagcaacgccagctgcaccaccaactgcctggcgccgctg
gccaaggtgctgaacgacaagtggggcatcaagcgcggcctgatgacgaccgtgcacgcg
gccaccgccacgcagaagaccgtggacggcccgagcaacaaggattggcgcggcggccgc
ggcatcctggaaaacatcattccctcgagcaccggcgccgccaaggccgtgggcgtggtg
atccccgagctcaacaagaagctcaccggcatgagcttccgcgtgccgacctccgacgtg
tcggtggtcgacctgacggtcgagctggtgaaggaagccacgtacaaggaaatctgcgcc
gagatgaaggcacagagcgaaggcgcgctcaagggcgtgctgggctacaccgaagacaag
gtcgtcgccaccgacttccgcggcgacccgcgcacctcgatcttcgacgccgaagccggc
attgcgctggacggcaccttcgtcaagctcgtgagctggtacgacaacgagtggggctac
tcgaacaagtgcctggagatggtgaaggtcgtgtcgaagtaa
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