Variovorax sp. PMC12: C4F17_19455
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Entry
C4F17_19455 CDS
T05380
Name
(GenBank) D-amino-acid oxidase
KO
K21061
D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00470
D-Amino acid metabolism
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4F17_19455
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Motif
Pfam:
DAO
FAD_binding_2
NAD_binding_8
Thi4
Pyr_redox_2
FAD_oxidored
3HCDH_N
HI0933_like
FAD_binding_3
MurD-like_N
UDPG_MGDP_dh_N
Lycopene_cycl
XdhC_C
Pyr_redox
EccE
GIDA
TrkA_N
ApbA
Pyr_redox_3
AlaDh_PNT_C
Epimerase
NAD_binding_7
NAD_binding_2
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AVQ82960
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Position
1:4211801..4212904
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AA seq
367 aa
AA seq
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MDADVIVIGAGIVGAACAHALAQAGLQVLVLDARTGGATGAGMGHLVVMDDNAAELELSR
RSVAQWRALAPRMSEDCAYSPCGTLWIAANDEEMAEAERKHQRLHAHGIDSRLLTAGELA
SAEPALRKGLAGALEVPGDGILYAPNAARWLLAQAADSVRVEHAKVAAIQDDGTLRLADG
SSRRAPQIVLANGIQATTLCPELPIRPKKGHLLITDRYPGTVHHQLVELGYVTSAHHSDG
DSVAFNVQPRPTGQLLVGSSRQFDTTDPAVEAPMLARMLQRTLDYLPGLANLNAVRSWTG
MRAASPDGLPLLGRHPWREKLWLAVGHEGLGVTTAPGSAQVLAALMTGARPDFDPAPYAP
RGLRGMA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggatgtcatcgtcatcggcgccggcatcgtcggcgcggcgtgcgcgcatgcg
ctcgcgcaggcggggctgcaggtgctggtgctcgatgcgcgcaccggcggcgccaccggc
gcgggcatgggccacctcgtggtgatggacgacaacgcggccgagctggaactgagccgg
cgttcggtcgcgcaatggcgcgcgctggcgccgcgcatgagcgaagactgcgcctacagc
ccctgcggcacgctctggatcgcggccaacgacgaagaaatggccgaggccgaacgcaag
caccagcgtctgcatgcgcacggcatcgacagccgcctgctgacggcgggcgaactggcg
agcgcggagcccgccttgcgcaagggcctggccggtgcgctcgaagtgcctggcgacggc
atcctctatgcgcccaacgcggcgcgctggctgctcgcgcaggccgcggattcggtgcgc
gtcgaacatgcaaaggtcgccgccatccaggatgacggcaccctgcggctcgccgacggc
agcagtcgccgcgcgccgcagatcgtgctcgccaacggcatccaggccacgacgctgtgc
cccgaactcccgatccgcccgaagaagggccacctgctgatcaccgaccgctatccgggc
accgtgcaccaccagctcgtcgagctcggctacgtgaccagcgcgcaccacagcgacggc
gattcggtcgccttcaacgtgcagccgcgccccaccgggcaactgctggtgggctcgtcg
cgacagttcgacaccaccgacccggcggtcgaggcgccgatgctggcgcgcatgctccag
cgcacgctcgactacctcccggggctcgccaacctcaacgccgtgcgttcatggaccggc
atgcgcgccgcgtcgcccgacggcctgccgttgctgggcaggcatccgtggcgcgagaag
ctctggctcgcggtcggccacgaaggcctcggcgtgacgaccgcgccgggcagcgcgcaa
gtgctcgccgcgctgatgaccggcgccaggcccgatttcgacccggcgccctatgcgccg
cgcggcctgcgaggcatggcatga
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