Variovorax sp. PMC12: C4F17_19465
Help
Entry
C4F17_19465 CDS
T05380
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase
KO
K22549
D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00470
D-Amino acid metabolism
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4F17_19465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_2
Pyr_redox_3
Thi4
DAO
GIDA
NAD_binding_9
Pyr_redox
AlaDh_PNT_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AVQ82962
LinkDB
All DBs
Position
1:4213152..4214450
Genome browser
AA seq
432 aa
AA seq
DB search
MTGIATDSCDLLVVGAGPAGMAAAVAAAPSGASIVVIDDNPAPGGQIWRDGPGAALPPAA
RKWRDALAAHANIRVRSGTRIVAIAAPDELLLEDAGGATRMAWRKLILCTGARELLLPFP
GWTLPGVTGAGGLQALVKAGMPVEGERIVIAGSGPLLLAAAATARAAGAKVLRIAEQASF
AAVARFGASLARWPGKAAQAVTLADAGYRTSSRIVSVHGAAQVESVRLLQGGKEADIACD
RVACGFGLTPNTQLGQLLGCALAPVGGGTQALSVDARQATSVHGIYAAGECTGFGGSERA
LVQGAIAGHAAVGNERAAKALESERTRWNAFAAQLHRAFALADAIRRMPQADTLVCRCED
VPFSALVGCTGWTDAKLHRRCGMGACQGRVCGDAAQFLFGWTPPAPRPPLSPVRIATLAG
LVDTADPVDARQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcatcgcgacggacagctgcgacctgctggtcgtcggcgccgggccggccggc
atggcggcggccgtggcggccgcgccgagcggcgcatccatcgtcgtgatcgacgacaac
cccgcgcccggcgggcagatctggcgcgacggccccggcgccgccctgccgccagcggcg
cgcaagtggcgcgacgcgctcgccgcgcacgcgaacatccgcgtgcgcagcggcacgcgc
atcgtcgccatcgccgcacccgacgaactgctgctcgaagacgctggcggcgcgacgcgc
atggcgtggcgcaagctcattctctgcaccggcgcgcgcgaactgctgctgcccttcccc
ggctggacgctgcccggcgtgacgggcgcgggcggcctgcaggcgctcgtcaaggcgggc
atgcctgtcgagggtgaacgcatcgtcatcgcgggcagcgggccgctgcttcttgccgcc
gcagcaaccgcacgcgcggcaggcgcgaaggtgctgcgcatcgccgagcaggcgtcgttc
gcagcggtcgcgcgcttcggcgccagcctggcgcgctggccgggcaaggccgcgcaggcc
gtgacgctggccgacgccggctatcgaacctcgtcgcgcatcgtctccgtgcatggcgcg
gcgcaggtcgaatcggtccggctgctgcaaggcggcaaggaagccgacatcgcctgcgac
cgcgtggcctgcggcttcggcctcacgcccaacacgcagctcgggcagctgctcggctgc
gcactcgcgcccgtcggcggcggcacgcaggccctgtcggtcgatgcaaggcaggccacc
agcgtccacggcatctacgccgccggcgaatgcaccggcttcggcggcagcgagcgcgcg
ctggtgcaaggcgccattgccggccacgccgccgtgggcaacgagcgcgcggcgaaagcc
ctcgaaagcgagcgcacccgctggaacgccttcgcggcgcagctgcaccgcgctttcgcg
ctggccgacgccatcaggcgcatgccgcaggccgacacgctcgtctgccgctgcgaggac
gttccgttctccgcactggtcggctgcaccggctggaccgacgccaagctgcaccgccgc
tgcggcatgggcgcctgccagggccgcgtctgcggcgatgcggcgcagttcctcttcggc
tggacgccgcccgcgcccaggccgccgctgtcgccggtccgcatcgcgacgctggcgggc
ctggtggacacagcggacccggtggacgcccgacaatga
DBGET
integrated database retrieval system
