Variovorax sp. PMC12: C4F17_19520
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Entry
C4F17_19520 CDS
T05380
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_19520
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
GntR family
C4F17_19520
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_11
HTH_36
HTH_50
HTH_AsnC-type
ABC_N
Motif
Other DBs
NCBI-ProteinID:
AVQ82973
LinkDB
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Position
1:4223128..4224594
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AA seq
488 aa
AA seq
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MEPLFELAIRLPGAGSRELLREVHRQLRGAILDGRLQPGARLPATRALAERLGVSRNTVL
AAYDLLLSEGYLLARPGAGTYVADILPDSRRGRPARPARGMAAGRDSRLVPLHVPGADLA
PTLQPQAARDDFRVGLPDVSAFPFDIWRRLSDRALRRVARQTADYADPQGQQALREAIAR
HVSFTRAVGCTAGDIVVTAGAQQAFGLLARILVVPGRTVVAVEQLFYPSLREAMLAAGAK
VVTVPTDTEGLCVERIPPEARVICVTPSHQFPTGVAMSPQRRAALLAFARARNAVVVEDD
YDSEFRFAGRPLDALQTLDRSESVFYVGTFSKSLFPALRLGFVVAPPWARAALVRARELA
DWHGPVLGQEALAAFIAEGHLARHIRKMRKLYGARRTALLDALARHGAGRLEAIPSNAGL
HLSAWLHGPTRADVVVERAAAAGIVLPPLSRFALDPHAPDVPNGLSFGYGLIGEAQIDGA
IQRLVQLL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacttttcgaactcgccatccgcctgccgggcgccggctcgcgcgaactgctg
cgcgaagtgcaccggcaattgcgcggcgccatcctcgacggccggctgcagcccggcgcg
cgcctgcccgccacgcgcgcgctggccgagcggctcggcgtgtcgcgcaacaccgtgctc
gcggcctacgacctgctgctgagcgagggctacctgctggcgcgtcccggcgcgggtacc
tacgtggccgacatcctgccggactcgcgacgcggccgtcccgcccgcccggcccggggc
atggcggccgggcgcgattcccggctggtgccgctgcacgtgcccggcgccgatctcgcg
ccgacgctgcagccgcaagccgcgcgcgacgacttccgcgtcggcctgcccgacgtgagc
gccttccctttcgacatctggcgccgcctgtccgaccgagcgctgcgccgcgttgcgcgg
cagaccgccgactacgccgacccgcagggccagcaggcactgcgcgaggcgatcgcgcgg
catgtgtcgttcacccgcgcggtgggctgcacagccggcgacatcgtcgtcacggccggc
gcgcagcaggccttcgggctgcttgcgcgcatcctggtcgtgccggggcgcaccgtggtc
gcggtcgagcagttgttctatccctcgctgcgcgaagcgatgctggccgcgggcgcgaaa
gtggtcaccgtgccgaccgacaccgagggcctgtgcgtcgagcgcattccgcccgaagcg
cgcgtgatctgcgtgacgccgtcgcaccagttccccaccggcgtggcgatgtcgccgcag
cggcgcgccgcactgctggccttcgcgcgggcacgcaatgcggtcgtggtggaagacgac
tatgacagcgaattccgcttcgccggccggccgctcgatgcgctgcagacgctggaccgc
tccgagtcggtgttctacgtcggcactttttccaagagcctgttccccgcgctgcgcctg
ggcttcgtggtcgcgccgccgtgggcccgcgcggcgctggtgcgggcgcgcgaactggcc
gactggcacggcccggtgctggggcaggaagcactcgcggccttcattgccgaggggcac
ctggcccggcacatccgcaagatgcgcaagctgtacggcgctcggcgcaccgccctgctc
gatgcgctggcgcggcacggcgccgggcggctcgaggcgattccatccaacgccgggctg
cacctgtcggcctggctgcacggcccgacgcgggccgatgtggtggtcgagcgcgccgct
gcggccggcatcgtgctgccgccgctctcgcgcttcgcgctcgatccgcacgcgcccgat
gtgcccaacgggctgtcgttcggctacgggctgatcggcgaagcgcagatcgacggcgcc
atccagcgcttggtgcaactgctgtaa
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