Variovorax sp. PMC12: C4F17_19725 Help Entry C4F17_19725       CDS       T05380                                  Name (GenBank) pilus assembly protein   KO K02674   type IV pilus assembly protein PilY1 Organism vam  Variovorax sp. PMC12 Brite KEGG Orthology (KO) [BR:vam00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vam02044]     C4F17_19725    02035 Bacterial motility proteins [BR:vam02035]     C4F17_19725 Secretion system [BR:vam02044]  Type II secretion system   Pilin secretion/fimbrial assembly protein    C4F17_19725 Bacterial motility proteins [BR:vam02035]  Pilus system   Pilus assembly proteins    C4F17_19725 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  T4P_PilY1 PA14 GLEYA Motif Other DBs NCBI-ProteinID:  AVQ83014 LinkDB All DBs Position 1:complement(4262883..4267046) Genome browser AA seq 1387 aa AA seqDB search MNNISILATRVTCAIALAGALFGVQAPADAASLADQPVFATSNVPGNLALTLSVEWPTAS RTAHTAAYASTSTFLGYFDPGKCYSYVVDTTPNETNTGDKSFFNPTAVATNRKCDGTKWS GNFLNWAATATIDPFRWAMTGGRRVVDTATDTILEKGYHAGQGLFDDRNLPTAEIAGATP FSNATSLGISVNGRKYAMRITASGASLKGEYYNNANKTLTGSATVTVAQDTVDHDWGSGA PVTGIGADNFAARYTGKFVAPTTGTYTFRVRADDGVRLWISGVLLIDKWIDQGATNYDAT VSLTAGQSFDVKIEYYENSGGAVMQFLWQKPTDNGFSTFTSNIGAAVTNDYTMRNRVCNP NAPGGVESNCKQYGNNWKPEGLIQQYARRMRFSAFGYLNEDGNGRDGGVMRARQKFVGPQ QPVPGLPDTTNSNKEWDENTGVFVRNPNPADATATSANGVTIADSGVINYLNKFGQIIPG NYKSNDPVSELYYAALRYYRNLGNVPEWSNLNTTDTNTTAKRLDGFPVITNWDDPIQYSC QRNFVLGIGDIYTHADKNVPGNKNNANEPAMPAAVTADKTVNAVTATNKVGQLQGMGDDL GTRTNISNGCCSNNSALMAGLAYDANTKDIRPDDANKPNSIGKQTVQTYWVDVLEQAFQA NNQFYLAAKFGGLKIPAGMQSTFDPYTFTGTIPQTWWATSGDMLTDTRNGGTTQPRPDNY FTAGRPDSMVDGLTKAFASIANAIKSFTTSFSLSSPQVSSSGAASYASQYDSNGWTGVLS GSQLTFPAGVPTLTEMWNTSTTLENQLAGTGWDTSRRVVTWNGTAGVPFRKANLTSAQVT ALDTPWVTGDDSSDFLNYLRGDRSKEKTTTDDTKPYRRRALLLGDIVNAKVTPVGPPSGQ FSNTVNPGYAKFKTDYASRPTIVYAGANDGMMHAFNGALTGTTAGQELFAYVPSMLFSGP SSPATPALNGLGQLGNPDYEHRYYVDASPKTFDIDFNTAGGVFTTTATGNNSDWHTVLIG GLGKGGKGFYAIDVTDPANMTTEANIKGKVLWEFSSATTGVGNTLGYSFGAPVVLKTKKY GWVVVLTSGYNNTDGYGYVYFVNPKTGALLEKVQTGNASAGLTQLTAYITDFTDGTADAL YAGDLNGQLWRFDVTAAKGSTGSYPAPLKLATLADASGTAQPITTQPLIEIDPKSKKRYV LFGTGQLLDTVDINSTAGQSFYAIIDGNATSFGTGGTYPITRSNLGALTEANLTGTNAFN LGTQLGWYLDLGKDATSGITWRVTLGATSFNGVVVFSTLLTTGDACSPSGQSRIYAVNYG SGTTALTTGAAYVSYSSAITDIQIINNNGRMQGIAGNVKGEVNQPPIDFGKGTGVRLLNW REVPTID NT seq 4164 nt NT seq  +upstreamnt  +downstreamnt atgaacaacatatccatccttgccacgcgcgtgacctgcgcgatagcgctcgccggcgcg ctctttggcgttcaggcaccagccgatgcagccagcctcgccgaccagcccgtcttcgcc acgtcgaacgtgcccggcaacctagcgctgacgctgtctgtggaatggcccacagcatcg cgcaccgcacacaccgccgcctacgccagcaccagcacgtttctgggctacttcgacccc ggcaagtgctactcgtacgtggtggataccacgcccaacgagaccaacaccggcgacaag agcttcttcaaccctacagccgtagccaccaaccgcaaatgcgacggcacgaagtggagc ggcaacttcctgaactgggcggccacggcgaccatcgacccgttccgctgggcaatgacc ggcggccggcgcgtggtggacactgcgaccgacaccatcctggagaagggctatcacgca ggacaaggcctgttcgacgaccgcaaccttcccaccgccgagattgcgggcgccacgcca ttcagcaacgcaacaagcctcggcatctccgtcaacggccgcaaatatgcaatgcgcatc acggcctccggcgcttcactcaagggcgagtactacaacaacgccaacaagacgctcact ggctcggcgaccgtcacggttgcacaggacaccgtcgaccacgactggggctccggcgcg cccgtgacgggcatcggcgcagacaacttcgcggcgcgctacacgggtaagttcgtggcg cctaccaccggcacctacacattccgggttcgcgcggacgatggcgttcgtctgtggatt tctggagtgctgctcatcgacaagtggatagatcagggcgcgaccaactacgacgcaaca gtttccctgacggcaggtcaaagcttcgacgtcaagatcgagtactacgagaactccggc ggcgcggtgatgcagttcctgtggcagaagcccacagacaatggcttcagcaccttcacc agcaacatcggtgccgcggtcaccaacgactacacgatgcgcaacagggtgtgcaacccc aacgcacccggcggcgtggaaagcaactgcaaacagtacggcaacaactggaagcccgag ggcctgatccagcagtatgcgcgccgcatgcgcttcagcgccttcggctacctcaacgag gacggcaacggccgcgatggcggcgtgatgcgcgcacgccagaagttcgtgggaccacag caaccggtgcccgggcttcccgacaccaccaattccaacaaggagtgggacgaaaacacc ggcgtgttcgttcgcaaccccaacccggccgacgccacggctacctcggccaacggcgtg accattgccgacagcggagtgatcaactacctcaacaagttcggccagatcattcccggc aactacaagtccaacgacccggtcagtgagctctactacgcagcgcttcgctattaccgt aacctgggcaacgtgccggaatggagcaacctcaacaccaccgacaccaacacgacggcg aaacgcctcgatggctttccggtcatcaccaattgggacgaccccatccaatactcgtgc caacgcaacttcgtgctcggtatcggcgacatctacacgcacgccgacaagaacgtaccc ggcaacaagaacaacgccaacgaacccgcgatgccggcggcggtcacggccgacaagaca gtcaatgcggtgacggcaaccaacaaggtcggccagttgcaggggatgggagacgacctc ggcacgcgtacgaatatctcgaacggttgctgcagcaacaactcggcgctcatggccggc ctcgcctacgacgccaacaccaaggacatccggcccgacgacgcaaacaagccgaactcc atcggcaagcagacggtgcagacgtattgggtcgacgtgctcgaacaggctttccaggcc aataaccagttctacctggccgcaaagttcggtggtctcaagatacccgccggcatgcag agcacattcgacccgtacacgttcaccggcaccatcccgcaaacctggtgggcgaccagc ggtgacatgctcaccgacacgcgcaatggcggcacgacccagccacggcccgacaactac ttcaccgcgggccggcccgactcgatggtggatggcctgacgaaggcattcgcgagcatt gccaacgccatcaagtcattcaccacgtcgttctcgctgtccagcccgcaggtgtcgtcc tccggcgcggcgtcttacgcgtcgcagtacgactcgaacggatggaccggcgtgctctcc ggcagccagctcacgttcccggccggcgtaccgaccctcacggagatgtggaacacttcc accacgctggaaaaccaacttgccggtaccggctgggatacctcacgccgggtggtcacc tggaacgggaccgcaggcgtgcccttccgcaaggcaaacctgacctcggcccaggtcacc gccctcgatacgccatgggtgacaggcgatgacagcagcgatttcctgaactacctgcgt ggtgaccggagcaaggaaaagacgaccaccgacgacaccaagccctaccgccgccgtgcc ttgctgctcggcgacatcgtgaatgcgaaagtcacaccggtaggccctccctcgggccag ttctcgaacacggtcaaccccggctatgcgaagttcaagacggactacgcctcccggccg accatcgtctacgcaggcgccaacgacggcatgatgcacgcattcaacggcgcattgacc ggaaccaccgccggccaggaactgttcgcgtacgtgccgagcatgctgttctcgggcccc agcagccccgccacaccggcgctcaacggcctgggacaactcggcaacccggactatgaa caccggtactacgtcgacgcatcgcccaagaccttcgacatcgacttcaatactgccggc ggcgtcttcaccactaccgccaccggcaacaactcggactggcacaccgtgctgatcggt ggccttggcaagggtggcaagggcttctacgccatcgacgtcaccgaccccgcgaacatg accaccgaggccaacatcaagggcaaggtgctttgggagttctccagcgctaccacaggc gtcggcaataccctgggctacagctttggtgcgccggtcgttctgaagaccaagaaatac ggctgggtcgtggtcctcacctcgggctacaacaacaccgatggctacggctatgtgtac ttcgtgaacccgaaaaccggagcgctgctggagaaagtgcaaacgggcaacgcgtcggca ggcctgacgcagctgaccgcctacatcaccgacttcacggatggcacggccgacgcactc tacgctggcgacctgaacggacagctctggcgcttcgacgtgacggcggcgaagggcagc accggctcttaccctgccccgttgaagcttgcgaccctggcggatgccagcggcacagcc caaccgatcaccacgcagccgctgattgaaatcgatcccaagagcaagaagcgctatgtg ctgttcggcacaggccagctgctcgacaccgtggacatcaattcgacagcgggtcagtcg ttctacgcgatcatcgacggcaacgcgacgagcttcggcaccggcggcacttatccgatc actcgcagcaacctgggtgcgctcaccgaggccaacctgacaggcaccaacgcgttcaac ctgggaacccagctgggctggtatctcgacctgggcaaggatgcgacttcggggatcacc tggcgcgtgacgctgggggcgacctctttcaatggggtcgtggtgttctccacgctgctg accaccggcgatgcttgcagcccatcgggtcagagccgtatctacgccgtgaattacggg tccggcacgacggcgctgacgacgggggcggcatacgtcagctacagcagcgcgatcacg gacattcagatcatcaacaacaacggccgaatgcagggcatcgcgggcaacgtgaagggt gaagtgaaccaaccgccgatcgatttcggcaaggggacgggagtgaggttgttgaattgg cgggaagtgccgacgattgattga

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