Variovorax sp. PMC12: C4F17_19735
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Entry
C4F17_19735 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K02672
type IV pilus assembly protein PilW
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vam02044
]
C4F17_19735
02035 Bacterial motility proteins [BR:
vam02035
]
C4F17_19735
Secretion system [BR:
vam02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
C4F17_19735
Bacterial motility proteins [BR:
vam02035
]
Pilus system
Pilus assembly proteins
C4F17_19735
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilW
N_methyl
Motif
Other DBs
NCBI-ProteinID:
AVQ83016
LinkDB
All DBs
Position
1:complement(4267657..4268829)
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AA seq
390 aa
AA seq
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MSIQQARSAMRERGLTLIELLVAMVIALVVTLAVTSAVIFGESTKRTTTSVNDINQSGSY
AAYLLDRAVRSAGSGFIQSWDLGVFGCKLQAKRSNTAILPRTTVFPVPFEKFLGNATGVA
DLRIAPLLIGKGQSSDGKSDVLMVMGGNAAAGDVPRPIISAGASDNIVRLDNTVQLKKND
IALVSQVGSTDCLLEQVDSSFVDSANNELATLNGTYYTAGVGTTLASLAASGSAYLTPLG
SGTANNVQFQLFGIGANNTLVSYDLLRSDGTDTPQTLADGVMEMHALYGLDTNTDGIIDT
WKAPDATGFDIKTMMTDGKLSRQVVAVRVGLILRSATLERDPVSQTIPEMFSDTGIKRDA
VTLTNDDRRYRYRVVEFTIPLRNTLLLPKS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcagcaagcccgcagcgcgatgcgcgaacgcggcctcaccctgatcgagcta
ctggttgccatggtcatcgcattggtggtgacgctggcagtcaccagcgccgtgatcttc
ggcgaatcgacaaagcgaacgaccacgtccgtcaacgacatcaatcaatccgggtcctac
gccgcttatctgctggaccgtgcggtgcgcagcgccggctccggcttcatccaatcgtgg
gacctgggcgtattcgggtgcaagctgcaggccaagcgcagcaacaccgcgatcctgccg
cgcaccacggttttccccgtgccgttcgagaaattcctcggcaacgccaccggggtcgcc
gatctgcgtatcgcaccgctgctgatcggcaaggggcagtcgtcagacggcaagtccgac
gtgctgatggtgatgggcgggaacgccgcagctggtgacgtaccacgcccgatcatttcg
gcaggtgccagcgacaacatcgttcgactggacaacaccgtacagctgaagaagaacgac
atcgcgctggtcagccaggtcggcagcacggactgtttgctcgagcaggtcgactcttcc
ttcgtggacagtgcgaacaacgaactcgccacgctcaacggcacctactacaccgcaggc
gtcggcaccacgctggcctcactggcggccagcggcagcgcctacctcacgccgctgggc
agcggtacggccaacaacgtgcagtttcagcttttcggcatcggtgcaaacaacacgctg
gtcagctacgacttgctacgcagcgatggcaccgacacccctcagaccctggccgacggc
gtcatggaaatgcatgccctctatggactggacaccaacacggacggcatcatcgacacc
tggaaggcacctgacgctacgggcttcgacatcaagaccatgatgacggacgggaagctc
agcagacaggtggttgccgtgcgcgtgggactgatcctgcgcagcgcgaccctcgagcgc
gatcccgtatcgcagaccattcccgaaatgttcagcgacacgggcatcaagcgcgacgcc
gtgaccctcacgaatgacgaccgccgctaccgctaccgcgtcgtcgaattcaccatcccg
ctgcgcaacaccctgttgctgcccaaatcatga
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