Variovorax sp. PMC12: C4F17_19765
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Entry
C4F17_19765 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K02672
type IV pilus assembly protein PilW
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vam02044
]
C4F17_19765
02035 Bacterial motility proteins [BR:
vam02035
]
C4F17_19765
Secretion system [BR:
vam02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
C4F17_19765
Bacterial motility proteins [BR:
vam02035
]
Pilus system
Pilus assembly proteins
C4F17_19765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilW
N_methyl
DUF4229
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AVQ84706
LinkDB
All DBs
Position
1:4271970..4272974
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AA seq
334 aa
AA seq
DB search
MKTRAHRSRGLTLVELLVAIALGLLLAAVAGYLLVSTNRAARAIDARAEQQEAANIVLDI
IGRDLKNAGFYPASFAASAGSSRLPGAYSNIVSSSKNAFDQGIFGCSAALFDVASGTCPA
AGTSAPDSLVVNYFSADNFGIEGVGTRKDCLRQDVELATFEGAEYNKDRAGSGDKGTGTV
VLPLFISNVYGLGDSYTYTQDGRSISTRSFRCAGNGPNTKPHQPIVPGVVELRFRYGVAE
ANTLESPARFFTATEVSAQPAATIDGQSKTAWQRVVAVQVCVVTKTLDASVRQTSSGSYV
DCDGVSRSFSGADRAIYKQQTRIFGVRNNLTRTF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcgtgcccacaggtcgcgcggcctcacattggtcgagctgctggttgcgatc
gcgctcgggctgctgctggccgccgtggccggctatctgctcgtttcgacgaaccgggcg
gctagggccatcgacgcccgcgccgagcagcaggaagccgccaacatcgtgctggacatc
atcggccgcgacctgaagaacgcgggcttctatccggccagcttcgcggcttcggccggg
tcttcgcgcttgcccggcgcctactcgaacatcgtgtcgagctcgaagaacgcgttcgac
cagggcatcttcggctgcagcgcggcgctgttcgacgtggccagcggaacctgcccggca
gccggcacctcggcgcctgattcgctcgtggtcaattacttttccgcggacaacttcggg
atagaaggcgtcggcacgcggaaggattgcctgcgccaggacgtggaactggccactttc
gagggggccgaatacaacaaggaccgcgccggctcgggcgacaaaggcaccggaaccgtg
gtcttgccgctgttcatcagcaacgtctacggcctgggcgacagctacacctacacgcag
gacggcaggtccatctccacccgcagctttcgctgcgcggggaacgggcccaacaccaaa
ccgcaccagcccatcgtcccgggcgtcgtcgaactgaggtttcgctacggggttgccgag
gcgaacacgctcgagtcgcccgcgcgcttcttcaccgcaacggaggtcagcgcacagccg
gcagccaccatcgacgggcaaagcaagaccgcctggcagcgcgtggtcgccgtgcaggtg
tgcgtcgtgaccaagacgctcgatgcatcggtgaggcagacctcgagcggcagctatgtg
gactgcgacggcgtctcgcgcagcttctccggcgcggatcgcgcgatctacaagcagcag
acccgcatcttcggcgtccgcaacaacctcacgaggacgttttga
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