KEGG   Variovorax sp. PMC12: C4F17_19910
Entry
C4F17_19910       CDS       T05380                                 
Name
(GenBank) DNA-binding response regulator
  KO
K11712  two-component system, LuxR family, response regulator DctR
Organism
vam  Variovorax sp. PMC12
Pathway
vam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4F17_19910
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vam02022]
    C4F17_19910
Two-component system [BR:vam02022]
 LuxR family
  DctS-DctR (C4-dicarboxylate transport)
   C4F17_19910
SSDB
Motif
Pfam: Response_reg GerE Sigma70_r4_2 Sigma70_r4 HTH_28 HTH_23
Other DBs
NCBI-ProteinID: AVQ83046
LinkDB
Position
1:4306802..4307428
AA seq 208 aa
MQPLIDGLIFIVDDDASVREALAWLLRSRRLASEHFGSAEAFEQFLDQGPLPQQPLCLLL
DVRMPGTSGLVLFDRLVERGLLPAMPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNAL
VDRIEHALNASLQALELQRQRRGLSERIAELTDRERDVMRLVIEGLPNKLIADQLAISVR
TVEVHRARVFDKMEVKSAVELANRLRDL
NT seq 627 nt   +upstreamnt  +downstreamnt
atgcaaccgctgatcgatggattgatctttatcgtggacgacgacgccagcgtgcgtgaa
gcgctcgcctggctgctgcgctcgcgccggctggccagcgagcatttcggcagcgcggag
gccttcgagcagttcctcgaccaggggccgctgccccagcagccgctgtgcctgctgctg
gacgtgcgcatgccgggcacgagcgggctggtgctgttcgaccggctcgtggagcgcggc
ctgctgcccgccatgccggtgatcttcctgaccgggcacgccgacgtgccgacggccgtc
gacgccgtgaagcgcggggcgttcgacttctgcgagaaaccgttctcggacaacgcgctg
gtcgaccgcatcgagcatgcgctgaatgcgtcgctgcaggcgctcgagctgcagcgccag
cgccgcggcctgtcggagcgcatcgccgagctgaccgaccgcgagcgcgacgtgatgcgg
ctcgtgatcgagggcctgcccaacaagctcatcgccgaccagctcgcgatcagcgtgcgc
acggtggaagtccaccgcgcgcgcgtgttcgacaagatggaagtgaagtcggccgtggag
ctggccaaccgcctgcgggacctctag

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