Variovorax sp. PMC12: C4F17_19985
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Entry
C4F17_19985 CDS
T05380
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_19985
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4F17_19985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
FaeA
Motif
Other DBs
NCBI-ProteinID:
AVQ83060
LinkDB
All DBs
Position
1:complement(4323679..4324371)
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AA seq
230 aa
AA seq
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MNARASNNTTTKPPAAADEGDGEAPATRGRSRKYTQVLGLINQAAIEVFASEGLAGASTQ
AIADKAGLSKAQLHYYIESKEALYRQVLQDILTDWIVVFGFSDEAFGPRKVLGDLIHRKM
VFSFDHPLRSRIFTAEMMRGAPVINDMMTTSKARTDQAAAVIRNWMNQGLMDKADPMLVL
FHIWAVTQFYADHATQAAYFRDTAQQGDEKDRRYLIEQVTDFLLKGAGVR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcgcgcttccaacaacaccaccaccaagccccccgccgctgccgacgagggc
gacggcgaggcccccgccacgcgcggacgctcgcgcaagtacacgcaggtgctcggcctc
atcaaccaggccgccatcgaggtgttcgcgagcgaggggctggccggcgcgtcgacccag
gccatcgccgacaaggcggggctgtcgaaggcgcagctgcactactacatcgagagcaag
gaagcgctgtaccggcaggtgctgcaggacatcctgaccgactggatcgtggtgttcggt
ttcagcgacgaagccttcggcccgcgcaaggtgctgggcgacctgatccaccgcaagatg
gtgttctcgttcgaccatccgctgcgctcgcgcatcttcacggccgagatgatgcgcggc
gcgccggtcatcaacgacatgatgaccacgagcaaggcccgcaccgaccaggccgccgcc
gtgatccggaactggatgaaccagggcctgatggacaaggccgacccgatgctcgtgctg
ttccacatctgggcagtgacgcagttctatgccgaccatgccacgcaggccgcctacttc
cgcgatacggcccagcaaggcgacgagaaagaccggcgctacctgatcgagcaggtgacc
gatttcctgctcaagggcgcgggggtcaggtag
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