Variovorax sp. PMC12: C4F17_20045
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Entry
C4F17_20045 CDS
T05380
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_20045
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_20045
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
C4F17_20045
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
C4F17_20045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_20
MarR
HTH_11
HTH_IclR
DUF1707
HTH_CodY
HTH_Crp_2
MarR_2
Rrf2
HTH_27
TrmB
HTH_34
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AVQ83072
UniProt:
A0A2P1VD54
LinkDB
All DBs
Position
1:complement(4335591..4336076)
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AA seq
161 aa
AA seq
DB search
MESIDKFDLAILQELQADGRLTNAELAQRVGLSAAPCWRRVRALEEAGFIKGYHAEIDRH
KIGLGVLAFVRVDTERVTHEATRKLEDAIRKLPDVVACHYISGTGTFELQVVAQDLDSFS
AFARQHLMNLPNVKDLHTSFSLGEVKASSALPLGHLAARGK
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcattgacaagttcgacctcgcaatcctgcaagaactgcaggccgacggacgc
ctcacgaacgccgagcttgcgcagcgcgtgggcctctcggccgcgccctgctggcgccgg
gtgcgggcgctggaggaggccggcttcatcaagggctaccacgccgagatcgaccgccac
aagatagggctgggcgtgctcgctttcgtgcgcgtggacaccgagcgcgtcacgcacgag
gccacccgcaagctggaagacgccatccgcaagctgcccgacgtggtcgcctgccactac
atcagcggcaccggcaccttcgagctgcaggtggtggcgcaggacctggacagcttctcg
gccttcgcgcgccagcacctgatgaacctgccgaacgtgaaagacctgcacaccagcttc
tcgctgggcgaggtgaaggccagcagcgcgctgccgctggggcacctggccgcccggggc
aagtag
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integrated database retrieval system
