Variovorax sp. PMC12: C4F17_20245
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Entry
C4F17_20245 CDS
T05380
Symbol
pyrF
Name
(GenBank) orotidine-5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00240
Pyrimidine metabolism
vam01100
Metabolic pathways
vam01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
C4F17_20245 (pyrF)
Enzymes [BR:
vam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
C4F17_20245 (pyrF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OMPdecase
DUF5990
GARS_C
Motif
Other DBs
NCBI-ProteinID:
AVQ83110
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All DBs
Position
1:4377537..4378361
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AA seq
274 aa
AA seq
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MTFLDKLAAAQQKNGSLLCVGLDPEPAKFPGQFKGDASRIFDFCARIVDATADLVIAFKP
QIAYFAAHRAEAQLEQLMEHMRRNAPDVPVILDAKRGDIGSTAEQYALEAFERYGADAVT
LSPFMGFDSVAPYLKHEGKGAFLLCRTSNPGGSDLQGQRLADVEGQPFLYEHVARLAQGP
WNLNGQLGLVVGATYPAEIERVRELAPTVPLLIPGVGAQGGDAVATVRAGWRADAPIIVN
SSRAICYASSGDDFAEAAKNAARSTRDALEAAKP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgactttcctcgacaagctggccgccgcacagcaaaaaaacggttcgttgctctgcgtg
gggctcgatcccgagccagccaaattcccggggcaattcaagggcgacgccagccgcatc
ttcgatttctgcgcgcgcatcgtcgacgcgacggccgacctggtcatcgccttcaaaccg
cagatcgcctatttcgcggcccaccgcgccgaagcccagctcgagcagctcatggagcac
atgcgccgcaacgcgcccgacgtgcccgtgatcctggacgccaagcgcggcgacatcggc
tccaccgccgagcagtacgcgctggaagccttcgagcgctacggcgccgacgcggtcacg
ctgtcgcccttcatgggcttcgattcggtggcgccgtacctgaagcacgagggcaagggc
gccttcctgctgtgccgcaccagcaaccccggcggctccgacctgcagggccagcgcctg
gcggatgtcgagggccagcctttcctgtacgagcacgtcgccaggctggcgcagggcccg
tggaacctcaacggccagctcgggctggtggtgggcgcgacctacccggcggaaatcgag
cgcgtgcgcgaactcgcgccgaccgtgccgctgctgattccgggggtcggcgcccagggc
ggcgacgccgtcgccaccgtgcgcgccggctggcgtgccgatgcgccgatcatcgtgaac
tcgtcgcgggccatctgctacgcatcgtcgggcgatgacttcgccgaagccgcgaagaac
gccgcgcgcagcacgcgcgacgcgctggaagccgccaagccctga
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