Variovorax sp. PMC12: C4F17_20300
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Entry
C4F17_20300 CDS
T05380
Name
(GenBank) tRNA guanosine(34) transglycosylase Tgt
KO
K00773
queuine tRNA-ribosyltransferase [EC:
2.4.2.29
]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_20300
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.29 tRNA-guanosine34 preQ1 transglycosylase
C4F17_20300
Transfer RNA biogenesis [BR:
vam03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C4F17_20300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGT
Motif
Other DBs
NCBI-ProteinID:
AVQ84712
LinkDB
All DBs
Position
1:complement(4386814..4387986)
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AA seq
390 aa
AA seq
DB search
MLNFELLKTDPDSHARRATLTLNHGKVQTPIFMPVGTYGTVKGVMPRSLEEMGAQIILGN
TFHLWMRPGLDVMASFGGLHGFEKWNKPILTDSGGFQVWSLGAMRKISEEGVKFASPVNG
DKLFLTPEVSMQIQTILNSDIVMQFDECTPYDTKGHITTEAEARISMELSLRWAKRCQAE
FNRLENPNALFGIVQGGMFENLREESLAALVDMDFPGYAIGGVSVGEPKEEMLHIMGHTP
HRLPANKPRYLMGVGTPEDLVQGVADGVDMFDCVMPTRNARNGTLFTRFGDLKMRNARHK
SDPQPIDPSCTCHACAGTSGVSWNDGGREGFSRAYLHHLDRCGEMLGPMLTTIHNLHYYL
NLMSEIRESLDAGTFTEFRARFKSERARGV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacttcgaactcctcaagaccgaccccgacagccacgcgcgccgcgccacgctc
acgctcaaccacggcaaggtgcagacgccgatcttcatgcccgtgggcacctacggcacg
gtcaagggcgtgatgccgcgcagcctggaggaaatgggcgcgcagatcatcctgggcaac
accttccacctgtggatgcgccccggcctcgacgtgatggccagctttggtgggctgcac
ggcttcgagaagtggaacaagcccatcctcaccgactcgggcggcttccaggtgtggtcg
ctgggcgcaatgcgcaagatcagcgaagagggcgtgaagttcgcgtcgcccgtcaacggc
gacaagctgttcctcacgcccgaggtctcgatgcagatccagaccatcctcaacagcgac
atcgtgatgcagttcgacgagtgcacgccctacgacaccaagggccacatcacgaccgag
gccgaggcgcgcatctcgatggaactgagcctgcgctgggccaagcgctgccaggcggag
ttcaaccggctggagaacccgaacgcgctcttcggcatcgtgcagggcggcatgttcgag
aacctgcgcgaagagtcgctggccgcgctggtggacatggacttccccggctacgccatc
ggcggcgtgagcgtgggcgagcccaaggaagaaatgctgcacatcatgggccacacgccg
caccggctgcccgcgaacaagccgcgctacctgatgggcgtgggcacgccggaagacctg
gtgcagggcgtggccgacggcgtcgacatgttcgactgcgtgatgcccacgcgcaatgcg
cgcaacggcacgctcttcacacgcttcggcgacctgaagatgcgcaacgcgcgccacaag
agcgatccgcagcccatcgaccccagctgcacctgccacgcctgcgcgggcacctccggc
gtgagctggaacgacggcgggcgcgaaggcttcagccgcgcctacctgcatcacctcgac
cgctgcggcgagatgctcgggccgatgctcacgaccatccacaacctgcactactacctg
aacctgatgagcgagatccgcgagtcgctggacgcgggcacgttcacggagtttcgcgcg
cgcttcaagtcggagcgcgcaagaggcgtctga
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