Variovorax sp. PMC12: C4F17_20315
Help
Entry
C4F17_20315 CDS
T05380
Name
(GenBank) TIGR01777 family protein
KO
K07071
uncharacterized protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
C4F17_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
DUF1731
GDP_Man_Dehyd
NmrA
NAD_binding_10
NAD_binding_4
3Beta_HSD
NAD_binding_3
KR
RmlD_sub_bind
adh_short
NAD_binding_2
F420_oxidored
ApbA
Motif
Other DBs
NCBI-ProteinID:
AVQ83122
LinkDB
All DBs
Position
1:4389859..4391355
Genome browser
AA seq
498 aa
AA seq
DB search
MTIDTHLLALQLMAAQGLMGAFDTLYHHEGTEALAQRNTARRELSIHAVRSSIYCAMFIG
LSSWAWHGVWAWVLLAVFGVEIVLTLWDFVVEDGSRLLPPTERVTHTVLAINAGAFIALL
AMNAVDWAAQPTALVWQSQGWLGAFLALCGVGVGISGLRDGLAARALFRRTAQEEQRAAD
APVRFGSKPQRVLVTGGTGFIGQILVRHLLADGHAVTVWTRDARSAAWGFGGAVRCVQAL
EQIPATDDVDVVINLAGARILGQRWSERRQRQLMQSRAGLTNTLVAWIATRARKPWLLLS
GSAIGYYGVQPQGDTAELAEDAPPQDIFMSALCQAWEQAARGAVAHGVHVACMRFGFVLG
HQGSLPQLLLPVALGMGGRLGSGRQWLSWVHVHDVIRAMAHVWSLAEQAGGNAAAAQAFN
FTAPGALSQEEFTRVAAGVMHRPFWMPTPAAPVRLLLGEQADLLLEGQRVVPAHLLQTGF
RFAFPDARSALTDLCRPR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgacacacacctgctggcgctgcagctcatggccgcacaggggctgatgggc
gcattcgacacgctctatcaccacgaaggcaccgaggcgctggcgcagcgcaacaccgcg
cggcgcgagctgtccatccacgcggtgcgctcgtcgatctactgcgccatgttcatcggg
ctgtcgtcgtgggcctggcacggcgtgtgggcctgggtgctgctcgcggtgttcggcgtc
gagatcgtgctcacgctgtgggacttcgtggtggaagacggcagccgcctgctgccgccc
accgagcgcgtcacgcacacggtgctggccatcaatgccggcgcgttcatcgcgctgctg
gccatgaacgcggtcgactgggcggcgcagcccacggcgctggtgtggcagtcgcaaggc
tggctcggcgcgttcctcgcgctgtgcggcgtgggcgtgggcatctcggggctgcgcgac
ggactggcggcgcgcgcgctgttccgccgcaccgcgcaggaagaacagcgcgcggccgat
gcgccggtgcgtttcggcagcaagccgcagcgcgtgctggtgactggcggcactggcttc
atcggccagatcctggtgcgccacctgctggccgacggccatgcggtgacggtgtggacg
cgcgatgcgcgctcggcggcctggggcttcggcggcgcggtgcgctgcgtgcaggcgctc
gagcagatcccggcgacggacgatgtcgacgtggtcatcaacctggcgggcgcgcgcatc
ctgggccagcgctggagcgagcggcgccagcgccagctgatgcaaagccgcgcgggcctc
acgaacacgctggtcgcgtggatcgccacgcgtgcgcgcaagccatggctgctgctgtcg
ggctcggccatcggctactacggcgtgcagccgcagggcgacaccgccgagctggccgaa
gacgcaccgccgcaggacatcttcatgtcggcgctgtgccaggcctgggagcaggccgcg
cggggcgcggtcgcgcacggcgtgcacgtggcctgcatgcgcttcggcttcgtgctgggc
caccagggctcgctgccgcagctgctgctgccggtggcgctcggcatgggcggccggctg
ggcagcgggcggcagtggctgtcgtgggtgcatgtgcatgacgtgatccgcgcgatggcc
catgtgtggagcctggccgagcaggccggcggcaatgcggcggcagcgcaggctttcaac
ttcaccgcgcccggtgcgctctcgcaggaggaattcacccgcgtggcggccggcgtgatg
caccgccccttctggatgccgacacccgccgcgccggtcaggctgctgctgggcgagcag
gccgacctgctgctcgaagggcagcgcgtggtgcccgcgcacctgctgcagaccgggttc
cgcttcgcgtttcccgatgcgcgcagcgccttgacggacctttgccgcccgcgctag
DBGET
integrated database retrieval system
