Variovorax sp. PMC12: C4F17_20640
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Entry
C4F17_20640 CDS
T05380
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00020
Citrate cycle (TCA cycle)
vam00630
Glyoxylate and dicarboxylate metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01210
2-Oxocarboxylic acid metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vam_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vam_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C4F17_20640
00630 Glyoxylate and dicarboxylate metabolism
C4F17_20640
Enzymes [BR:
vam01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
C4F17_20640
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GFIT
Motif
Pfam:
Citrate_synt
HTH_17
DUF3035
Motif
Other DBs
NCBI-ProteinID:
AVQ84720
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Position
1:complement(4449301..4450539)
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AA seq
412 aa
AA seq
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MTTKRTAPLWLPAAEALELMQVRPQTLYASVSRGRIRAKPDAADPRRSLYHRDDVQRIAA
RARGRRSSEAVASEAIQWGEPVLASAVSTVAEGRLLYRGHDACALSEHATLEEVAGLLWE
SAPPHFPASAVPVASQGNSSPLQAGLLALAARAATDLPARGRSRNVLQAEAAEAIGALAD
ALLGTAPARAMPLHMRLASAWRRPRAADDLRRVLVLLADHELNASTFAARVTASTGASVA
ACLLTGLSTLTGPLHGGASAAVQALIRSAAAIGTEAAVREWLAHDRPLAAFGHPLYPDGD
ARCRALLANIELPPAFRELRDVGEKLLGDAVNVDFALAALAAVHKLPPGAPLMLFALSRT
VGWTAHVLEQQGSGQLIRPRARYTGPTADAATQELSESTPRARSRMPSSSRG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaagagaaccgcgccgctgtggctgccggccgccgaagccctcgaactgatg
caggtgcgcccgcagacgctctacgccagcgtgagccgcggccgcatccgcgccaagccc
gatgccgccgacccgcgccgcagcctctaccaccgcgacgacgtgcaacgcatcgccgcg
cgcgcacggggccgccgcagcagcgaggcggtggcgagcgaagccatccagtggggcgaa
ccggtgctggcttcggctgtgtccacggtggccgaaggccggctgctgtaccgggggcac
gacgcctgcgcgctgtcggagcacgccacgctcgaggaagtggcggggctgctctgggaa
agcgcgccgccgcactttccggcttccgcggtgccggtggcctcgcaaggcaattcgtca
ccgctccaggccggcctgctcgcgctggcggcgcgcgccgccaccgacctgcccgcgcgg
ggccggtcacgcaacgtgctgcaggccgaggctgcggaagcgatcggcgcgctggccgat
gcattgctcggcaccgcacccgcgcgcgccatgccgctgcacatgcggctggcctcggca
tggcgccgcccgcgcgccgccgacgatctgcgccgcgtgctggtgctgctggccgaccac
gagctcaatgcgtcgaccttcgcggcgcgcgtgacggcgtcgaccggcgcgtcggtggcg
gcttgcctgctcaccggactctcgaccctgacgggcccgctgcatggcggcgcctccgcg
gcggtacaggcgctgatccgcagcgcggcggccatcggcaccgaagcggcggtgcgcgag
tggctcgcgcacgaccggccgctggcggccttcgggcatccgctctatccggatggcgat
gcacgctgccgcgcgctgctggccaacatcgaactgccgccggcattccgcgagctgcgc
gatgtcggtgagaagctgctcggcgacgcagtgaacgtggacttcgcgctcgcagcgctg
gcggcggtacacaagctgccgccgggcgcgccactcatgctgttcgcgctttcgcgcacc
gtcggctggacggcgcacgtgctggagcagcagggcagcggccagctgatccgcccgcgt
gcgcgctacaccggccccacggccgatgcggccacgcaggagctcagtgaatcgacgcct
cgtgcgcgatctcgaatgccttcgtcatctcgcggttga
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