Variovorax sp. PMC12: C4F17_20645
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Entry
C4F17_20645 CDS
T05380
Name
(GenBank) citrate synthase/methylcitrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00020
Citrate cycle (TCA cycle)
vam00630
Glyoxylate and dicarboxylate metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01210
2-Oxocarboxylic acid metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vam_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vam_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C4F17_20645
00630 Glyoxylate and dicarboxylate metabolism
C4F17_20645
Enzymes [BR:
vam01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
C4F17_20645
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Motif
Pfam:
Citrate_synt
WGR
Motif
Other DBs
NCBI-ProteinID:
AVQ83179
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Position
1:4450622..4451743
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AA seq
373 aa
AA seq
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MNNDDGSLEGVVAAHTVLSEVDGEAGRLVIRGHALDEIAQRWRYEDVVGLLFEGFFDTLP
AAEALRTAIGRARREAFERLQPNDDAVLRRLPPIEAVRALLARLPDGDDLPTALRLVAAP
AVYTAAVMRWRLGVQALAPDEALPHAADMLRMLHGRAPTPAQSAALDTYLVTVCDHGLNA
STFAARVVASTGAGLASAVIAGISALKGPLHGGAPGPVLDALDAIGSAGNARAWLEQAVA
EGQRLMGFGHRIYRVRDPRADALKGALGRLGKEGSVNAARFALAEAAEQAALAILREKKP
GRALETNVEFYTALLLEALGFGRESFTCVFAAGRVGGWVAHAREQVKKGRLIRPQSVYVG
PEPEEAGEAALAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgacgatggcagcctcgaaggcgtggtggccgcgcataccgtgctgtccgag
gtggacggcgaggccggccggctcgtgatccgcggccatgcgctggacgagatcgcgcag
cgctggcgctatgaagacgtggtgggcctgctgttcgaaggcttcttcgacacgctgccc
gccgccgaagccctgcgcaccgccattggccgcgcgcgccgcgaagccttcgagcgcctg
cagcccaacgacgacgccgtgctgcgccggctgccgcccatcgaggcggtgcgcgcgctg
ctggcacggctgccggacggcgacgacctgccgaccgcgctgcgcctggtggccgcgccc
gccgtgtacaccgccgcggtgatgcgctggcgcctgggcgtgcaggcgctcgcacccgac
gaggcactgccgcacgccgccgacatgttgcgcatgctgcatggccgcgcgcccacgccg
gcgcagagcgccgcgctcgacacctacctcgtcaccgtgtgcgaccacggcctcaacgcc
tcgaccttcgcggcgcgcgtggtcgcatccaccggcgccggcctggcttccgccgtgatc
gcgggcatcagcgcgctcaaggggccgctgcacggtggcgcgcccggcccggtgctcgat
gcgctcgacgccatcggcagcgccggcaatgcccgcgcatggctggagcaggccgtggcc
gagggccagcggctgatgggcttcggccatcgcatctaccgcgtgcgcgatccacgcgcc
gatgcgctcaagggcgcgctcgggcggctcggcaaggagggcagcgtcaatgccgcgcgc
ttcgcgctggccgaggcggcggagcaggccgcgctggccatcctgcgcgagaagaagccg
ggccgcgcgctggagaccaacgtcgagttctacaccgcgctgctgctggaggcgctgggc
ttcggccgcgagagcttcacctgcgtgttcgcggccggccgcgtgggcggctgggtggcg
catgcgcgcgagcaggtgaagaaggggcggctgatccgtccgcagtcggtctacgtgggg
cccgagcccgaggaggcgggcgaagccgcactcgcgcactga
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